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Table 2 General features for each eIF3 subunit found from L. major , T. brucei , T. vaginalis and G. duodenalis

From: The translation initiation complex eIF3 in trypanosomatids and other pathogenic excavates – identification of conserved and divergent features based on orthologue analysis

eIF3 subunit

(TriTrypDB) accession

Size (MW –KDa)

Comparison with human homologue

Gene product description at TriTrypDB

% Identity (similarity)

% Query coverage

eIF3a

LmjF.17.0010

774 (87.6)

20 (38)

51

Hypothetical protein, conserved

Tb927.7.6090

762 (88.2)

22 (43)

61

Hypothetical protein, conserved

eIF3b

LmjF.17.1290

709 (80.8)

25 (42)

64

Translation initiation factor, putative

Tb927.5.2570

696 (79.8)

22 (39)

91

Translation initiation factor, putative (EIF3B)

TVAG_333940

608 (68.2)

19 (40)

96

Eukaryotic translation initiation factor 3 subunit, putative

GL50803_15495

871 (98.5)

19 (37)

55

Hypothetical protein

eIF3c

LmjF.36.6980

731 (82.0)

24 (46)

44

Eukaryotic translation initiation factor 3 subunit 8, putative

Tb927.10.8270/ Tb927.10.8290

740 (84.3)

24 (44)

74

Eukaryotic translation initiation factor 3 subunit 8, putative

TVAG_184380

773 (90.0)

26 (47)

48

Hypothetical protein

GL50803_24279

793 (89.5)

19 (39)

21

Hypothetical protein

eIF3d

LmjF.30.3040

531 (60.6)

24 (40)

90

Eukaryotic translation initiation factor 3 subunit 7-like, putative

1 Tb927.6.4370

506 (57.9)

29 (46)

75

Eukaryotic translation initiation factor 3 subunit 7-like, putative

TVAG_062640

464 (52.8)

25 (45)

63

Eukaryotic translation initiation factor 3 subunit, putative

eIF3e

LmjF.28.2310

405 (46.4)

28 (47)

93

Eukaryotic translation initiation factor subunit, putative

Tb927.11.11590

413 (46.7)

27 (47)

72

Eukaryotic translation initiation factor subunit, putative

eIF3f

LmjF.25.1610

326 (36.7)

29 (50)

27

Hypothetical protein, conserved

Tb927.3.1680

318 (35.1)

2~

10

Hypothetical protein, conserved

eIF3g

LmjF.34.2700

255 (28.8)

26 (47)

57

Hypothetical protein, conserved

Tb927.4.1930

272 (31.3)

23 (42)

86

RNA-binding protein, putative (EIF3D)

eIF3h

LmjF.07.0640

335 (37.9)

21 (45)

65

Hypothetical protein, conserved

Tb927.8.1170/ Tb927.8.1190

331 (36.4)

22 (40)

50

Hypothetical protein, conserved

TVAG_105990

329 (38.0)

24 (44)

82

Eukaryotic translation initiation factor 3 subunit, putative

eIF3i

1LmjF.36.3880

352 (38.2)

29 (50)

96

Eukaryotic translation initiation factor 3 subunit 2, putative

Tb927.11.9610

342 (37.7)

38 (57)

95

Eukaryotic translation initiation factor 3 subunit 2, putative (eIF-3 beta)

TVAG_114460

371 (41.5)

27 (42)

88

Eukaryotic translation initiation factor 3 subunit, putative

GL50803_13661

350 (38.4)

24 (43)

91

Eukaryotic translation initiation factor 3 subunit 2

eIF3j

LmjF.25.2120

211 (23.5)

22 (37)

79

Hypothetical protein, conserved

Tb927.3.2220

220 (23.8)

25 (43)

53

Hypothetical protein, conserved

GL50803_15546

261 (29.2)

23 (40)

98

Hypothetical protein

eIF3k

LmjF.32.2180

233 (26.3)

28 (39)

59

Hypothetical protein, conserved

Tb927.11.15420

205 (23.1)

25 (46)

90

Hypothetical protein, conserved

eIF3l

LmjF.36.0250

633 (72.6)

25 (45)

65

Eukaryotic translation initiation factor 3 subunit L, putative

 

Tb927.10.4640

488 (55.6)

25 (43)

87

Eukaryotic translation initiation factor 3 subunit L, putative

  1. In addition, a comparison against H. sapiens eIF3 subunits was performed.
  2. 1In the TriTrypDB database the AUG from these sequences were likely misidentified since they generate peptides missing from orthologues in related species and were removed here.
  3. 2The Identity (Similarity) levels for this protein were not significant and were omitted from the table.