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Table 4 Biological process (BP) terms and annotation clusters significantly down-regulated due to the main effect of age

From: Transcriptional markers of sub-optimal nutrition in developing Apis mellifera nurse workers

Cluster Description N X 2 adj A OrthologuesB
GO:0005524 ATP binding (MF) 10 0.0029 FBgn0260990, FBgn0261014, FBgn0032243, FBgn0025743, FBgn0026059, FBgn0000723, FBgn0030343, FBgn0015615, FBgn0036486, FBgn0051729
Kegg:03040 Spliceosome 3 0.0099 FBgn0031390, FBgn0038927, FBgn0031266
GO:0007391 Dorsal closure (BP)C 3 0.0048 FBgn0010434, FBgn0000723, FBgn0044323
IPR001680, IPR011046, IPR019775 WD40 repeat, WD40 repeat-like-containing domain, WD40 repeat, conserved site 5 <0.0001 FBgn0037758, FBgn0029903, FBgn0044323, FBgn0038927, FBgn0043362
IPR001680, IPR011046, IPR019775, IPR020472, IPR019782, IPR017986, IPR019781 WD40 repeat, WD40 repeat-like-containing domain, WD40 repeat, conserved site, G-protein beta WD-40 repeat, WD40 repeat 2, WD40-repeat-containing domain, WD40 repeat, subgroup 4 <0.0001 FBgn0029903, FBgn0044323, FBgn0038927, FBgn0043362
IPR011046 WD40 repeat-like-containing domain 6 <0.0001 FBgn0037758, FBgn0029903, FBgn0024698, FBgn0044323, FBgn0038927, FBgn0043362
GO:0003779 Actin binding (MF) 3 0.0109 FBgn0035347, FBgn0010434, FBgn0029903
IPR016024 Armadillo-type fold 4 0.0248 FBgn0260990, FBgn0030674, FBgn0043362, FBgn0031266
GO:0016319 Mushroom body developmentD 2 0.0071 FBgn0025743, FBgn0010051
GO:0007030 Golgi organizationD 2 0.0019 FBgn0261014, FBgn0033075
  1. AX2adj refers to the significance of the Fisher’s exact test with a Benjamini-Hochberg correction for multiple comparisons.
  2. BOrthologues represent Drosophila melanogaster genes similar to the differentially expressed transcripts discovered in the present study that are listed in FlyBase.
  3. CTerms that were significant BP terms and were part of a significant gene annotation cluster.
  4. DTerms that represented significant BP terms but did not form a significant gene annotation cluster.