Skip to main content

Table 6 Biological process (BP) terms and annotation clusters down-regulated with age only in pollen deprived bees

From: Transcriptional markers of sub-optimal nutrition in developing Apis mellifera nurse workers

BP term or cluster

Description

N

X 2 adj A

OrthologuesB

GO:0007391

Dorsal closure (BP)C

3

<0.0001

FBgn0044323, FBgn0010434, FBgn0000723

GO:0005488

Binding (MF)

3

0.0357

FBgn0031266, FBgn0021847, FBgn0030674

GO:0046331

Lateral inhibition (BP)C

3

0.0075

FBgn0029685, FBgn0015615, FBgn0025743

IPR016024

Armadillo-type fold

4

<0.0001

FBgn0031266, FBgn0043362, FBgn0260990, FBgn0030674

GO:0005524

ATP binding (MF)

9

<0.0001

FBgn0051729, FBgn0036486, FBgn0261014, FBgn0032243, FBgn0015615, FBgn0025743, FBgn0026059, FBgn0260990, FBgn0000723

GO:0005524, GO:0006468, IPR002290, IPR000719

ATP binding (MF),protein phosphorylation (BP), Serine/threonine-protein kinase domain, Protein kinase, catalytic domain

3

0.0080

FBgn0025743, FBgn0260990, FBgn0000723

IPR011046

WD40 repeat-like-containing domain

7

<0.0001

FBgn0024698, FBgn0044323, FBgn0027518, FBgn0043362, FBgn0037758, FBgn0029903, FBgn0038927

GO:0003779

Actin binding (MF)

3

<0.0001

FBgn0010434, FBgn0029903, FBgn0035347

GO:0000398

Nuclear mRNA splicing, via spliceosome (BP)C

3

0.0080

FBgn0031266, FBgn0034002, FBgn0038927

Kegg:03040

Spliceosome

3

<0.0001

FBgn0031266, FBgn0038927, FBgn0031390

GO:0006468

Protein phosphorylationD

3

0.0148

FBgn0025743, FBgn0260990, FBgn0000723

GO:0006378

mRNA polyadenylationD

2

<0.0001

FBgn0024698, FBgn0260780

GO:0016319

Mushroom body developmentD

2

<0.0001

FBgn0010051, FBgn0025743

GO:0048749

Compound eye developmentD

2

0.00488

FBgn0043362, FBgn0025743

GO:0006813

Potassium ion transportD

2

<0.0001

FBgn0037244, FBgn0037758

GO:0006281

DNA repairD

2

<0.0001

FBgn0036486, FBgn0015283

GO:0007030

Golgi organizationD

2

<0.0001

FBgn0261014, FBgn0033075

  1. AX2adj refers to the significance of the Fisher’s exact test with a Benjamini-Hochberg correction for multiple comparisons.
  2. BOrthologues correspond to those pictured in Figure 3B (left panel) and represent Drosophila melanogaster genes that are listed in FlyBase.
  3. CTerms that were significant BP terms and were part of a significant gene annotation cluster.
  4. DTerms that represented significant BP terms but did not form a significant gene annotation cluster.