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Figure 3 | BMC Genomics

Figure 3

From: Transcriptome sequencing of Atlantic salmon (Salmo salar L.) notochord prior to development of the vertebrae provides clues to regulation of positional fate, chordoblast lineage and mineralisation

Figure 3

Overview of the salmon notochord transcriptome from RNA-seq. (A) Genomic location of mapped reads in percentage in all salmon notochord libraries. (B) Distribution of Augustus-predicted gene length in basepair (bp) < 5000 bp; the others were not plotted. The red dotted line indicates the average gene length of all genes, which was 872 bp. (C) Distribution of expression (in log2 scale) of all genes in libraries, grouped by development stages (T1:510 ± 20 d°, T2: 610 ± 20 d°, T3: 710 ± 20 d°). (D) Venn diagrams showing number of differentially expressed genes from NOISeq between pair-wise comparison between summed spatial libraries (SumA, SumM, SumP) and summed temporal libraries (SumT1, SumT2, SumT3). Abbreviations: A (anterior), M (mid), P (posterior).

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BMC Genomics

ISSN: 1471-2164

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