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Table 3 Logistic regression results for ECA 18 haplotype block 1

From: A genome-wide association study demonstrates significant genetic variation for fracture risk in Thoroughbred racehorses

Haplotype Odds ratio t-statistic (Wald test) P-value Frequency in cases Frequency in controls
GGAGGCTAAA 0.511 15 1 × 10-4 0.738 0.856
TAGAACCGGG 1.42 3.66 0.161 0.196 0.130
TGGAATTAAG 3.39 5.41 0.042 0.029 0
GAGAACCGGG 1.8 × 1011 2.51 0.286 0.024 0
  1. Background of horse (flat or National Hunt-bred) and sex were fitted as covariates in the haplotype logistic regression option in PLINK, p-values were derived using 10,000 permutations.