Table 1 Summary of 454 transcriptome sequencing and assembly data
Parameters | C1184 | C1234 |
|---|---|---|
Response to black rot disease | Susceptible | Resistant |
No. of HQ reads | 92,255 | 127,522 |
Total number of assembled contigs | 6,037 | 8,068 |
No. of singletons | 28,651 | 32,879 |
No. of unigenes | 34,688 | 40,947 |
Largest contig length (bp) | 3,820 | 6,337 |
Average contig length (bp) | 693 | 730 |
N50 length (bp) | 734 | 781 |