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Table 2 Blast search of SQ1 gene sequences generated by model fish species

From: Construction of a radiation hybrid panel and the first yellowtail (Seriola quinqueradiata) radiation hybrid map using a nanofluidic dynamic array

 

Danio rerio

Oryzias latipes

Tetraodon nigroviridis

 

Gene

Chr

Gene

Chr

Gene

Chr

Sequ10077EST2

CSE1L

11

CSE1L

5

CSE1L

11

Sequ10270EST2

RUVBL1

6

RUVBL1

5

RUVBL1

7

Sequ11146EST3

–

11

CSNK2A1

16

CSNK2A3

–

Sequ11253SNP2

–

–

SHQ1

5

–

–

Sequ11351EST3

AKR7A3

11

AKR7A3

5

AKR7A3

11

Sequ13632SNP3

TRIM62

11

TRIM62

5

TRIM62

11

Sequ01628SNP2

–

–

–

–

–

–

Sequ02007SNP1

–

–

–

–

–

–

Sequ20398EST2

AHCY

6

AHCY

5

AHCY

–

Sequ20407EST2

PSMD6

11

PSMD6

5

PSMD6

11

Sequ20554SNP2

TP53RK

11

TP53RK

–

TP53RK

–

Sequ20598SNP2

IGFN1

6

IGFN1

5

IGFN1

11

Sequ20655SNP2

IGFN1

6

IGFN1

5

IGFN1

9

Sequ21165SNP2

–

–

–

–

–

 

Sequ21581SNP2

–

–

–

–

–

 

Sequ02185SNP1

–

–

–

–

–

 

Sequ25975EST2

UBAP1

21

UBAP1

5

UBAP1

11

Sequ28315SNP2

ZGC

23

MYL6

7

–

11

Sequ28651EST2

WDR77

–

WDR77

5

WDR77

11

Sequ03558SNP1

–

–

–

–

–

–

Sequ43398EST3

–

–

–

–

–

–

Sequ06081EST2

ALDH1L1

6

ALDH1L1

5

ALDH1L1

–

Sequ06483EST2

TIMM17A

11

TIMM17A

5

TIMM17A

11

Sequ06491EST2

RPN1

11

RPN1

5

RPN1

11

Sequ06979EST2

SEC61A1

6

SEC61A1

5

SEC61A1

11

Sequ07395EST2

CAPZA1

8

–

5

–

13

Sequ08208EST2

GNAT1

6

GNAT1

–

GNAT1

11

Sequ08572EST2

–

–

ATAD3A

–

ATAD3A

11

Sequ09151SNP2

–

–

–

–

–

–

Sequ09916EST2

BYSL

22

BYSL

5

BYSL

11