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Table 4 Gene-trait matching with functions resulting from hierarchical clustering analysis

From: Comparative genomics of the Bifidobacterium brevetaxon

Carbohydrate HCL cluster Functions
Ribose Cluster45 Ribose transport system permease protein rbsD
   Conserved hypothetical membrane spanning protein
   pfkB family carbohydrate kinase
   NADH-dependent butanol dehydrogenase 1
   Phosphoglycolate phosphatase
   Inosine-uridine preferring nucleoside hydrolase
   pfkB family carbohydrate kinase
   N-(5’-phosphoribosyl) anthranilate isomerase
   Cobalt transport protein cbiQ
   Conserved hypothetical membrane spanning protein
   Ribokinase
Galactan/Sucrose Cluster6 Amylosucrase or alpha-glucosidase
   Glycosyl hydrolases family 53, Endogalactanase, galactan metabolism
   Conserved hypothetical protein, PhoU-like domain
   Transporter
   Transcriptional regulator
   Narrowly conserved hypothetical membrane spanning protein, MFS superfamily
   Narrowly conserved hypothetical membrane spanning protein
   Conserved hypothetical membrane spanning protein
   Transporter
Melezitose Cluster10 Raffinose synthase or seed imbibition protein Sip1/Alpha-galactosidase
Cellobiose Cluster36 Glycosyl hydrolases family 32, Beta-fructosidase or sucrose-6-phosphate hydrolase
   Cellodextrin binding protein
Mannitol/sorbitol Cluster23 AraC family transcriptional regulator
   Alcohol dehydrogenase
   Putative glyoxalase family protein
   Alcohol dehydrogenase
   Sugar isomerase (SIS)
   Putative ABC transporter, permease protein
   ABC transporter, permease protein
   ABC transporter, permease protein
   Xylulokinase
   Putative ROK family protein