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Table 1 Functional comparison of eRNA, miRspring, and miRDeep2

From: eRNA: a graphic user interface-based tool optimized for large data analysis from high-throughput RNA sequencing

Functionality

eRNA

miRspring

miRDeep2

Identification of known miRNAs

+

+

+

Visualization of analytic results

-

+

+

Discovery of miRNAs

-

-

+

miRNA expression profiling analysis

+

-

+

Batch data processing

+

-

-

Visualization of sequencing quality control

+

-

-

  1. +, available functions. -, unavailable functions.