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Table 1 Top expressed miRNAs in bovine MAC-T cells with or without challenge with E. coli or S. aureus bacteria

From: Transcriptome microRNA profiling of bovine mammary epithelial cells challenged with Escherichia coli or Staphylococcus aureusbacteria reveals pathogen directed microRNA expression profiles

miRNA ID Total no. of reads Ratio*
All samples Control group E. coligroup S. aureusgroup
bta-miR-21-5p 1494737 16.02% 15.89% 16.18% 16.07%
bta-miR-27b 1416234 15.18% 14.65% 15.46% 15.77%
bta-miR-22-3p 780733 8.37% 8.61% 8.38% 7.95%
bta-miR-184 508224 5.45% 5.65% 5.27% 5.30%
bta-let-7f 467126 5.01% 4.83% 4.94% 5.39%
bta-miR-205 424274 4.55% 4.56% 4.67% 4.39%
bta-miR-92a 363202 3.89% 3.74% 4.02% 4.01%
bta-miR-182 362632 3.89% 3.60% 3.87% 4.41%
bta-miR-31 261303 2.80% 2.92% 2.80% 2.60%
bta-let-7a-5p 190668 2.04% 2.19% 1.81% 2.05%
bta-miR-222 172392 1.85% 1.88% 1.84% 1.80%
bta-let-7i 166440 1.78% 1.73% 1.75% 1.92%
bta-miR-221 141821 1.52% 1.57% 1.51% 1.44%
bta-miR-26a 129420 1.39% 1.45% 1.39% 1.28%
bta-miR-148a 123204 1.32% 1.24% 1.40% 1.37%
bta-miR-27a-3p 118012 1.26% 1.34% 1.26% 1.14%
bta-miR-186 104935 1.12% 1.12% 1.15% 1.10%
bta-miR-191 103301 1.11% 1.08% 1.13% 1.12%
Total 7328656 78.55% 78.04% 78.84% 79.11%
  1. *Ratio refers to the total number of reads of a miRNA as compared to all reads of known bovine miRNAs detected in this study (miRBase Release 19).