Table 2 Genes and target regions
From: Target enrichment using parallel nanoliter quantitative PCR amplification
Name | Ensembl ID | Number of exons | Target region | Number of primers | Capture size (bp) |
|---|---|---|---|---|---|
BRCA1 | ENSG00000012048 | 12 | 1693 | 33 | 14202 |
MLH1 | ENSG00000076242 | 16 | 6025 | 18 | 7416 |
PALB2 | ENSG00000083093 | 9 | 9027 | 19 | 8072 |
MSH2 | ENSG00000095002 | 8 | 4605 | 20 | 8095 |
TGFBR1 | ENSG00000106799 | 63 | 13147 | 25 | 11159 |
PHOX2B | ENSG00000109132 | 34 | 9371 | 4 | 2028 |
MSH6 | ENSG00000116062 | 27 | 10930 | 16 | 7441 |
VHL | ENSG00000134086 | 16 | 10701 | 4 | 1896 |
APC | ENSG00000134982 | 3 | 3737 | 35 | 15085 |
BRCA2 | ENSG00000139618 | 10 | 4328 | 43 | 20068 |
NOTCH1 | ENSG00000148400 | 3 | 538 | 32 | 16514 |
ATM | ENSG00000149311 | 3 | 565 | 63 | 26598 |
TGFBR2 | ENSG00000163513 | 16 | 3307 | 19 | 7987 |
PTEN | ENSG00000171862 | 13 | 4003 | 10 | 4329 |
NF2 | ENSG00000186575 | 4 | 342 | 17 | 6972 |
FLCN | ENSG00000264187 | 12 | 1495 | 13 | 5586 |
Total | 249 | 83814 | 371 | 163448 |