Table 1 The CT26 gp70 SNVs relative to the mm9 reference genome (negative strand)
From: Immunomic, genomic and transcriptomic characterization of CT26 colorectal carcinoma
Mm9 coordinate | Reference | Mutation | Zygosity | AA change | DbSNP 128 | Observed in Genbank mRNAs? |
|---|---|---|---|---|---|---|
chr8:125952138 | T | A | Homo | S > T | rs30558843 | Many, including CT26 [mRNA GU441834] |
chr8:125951873 | G | A | Hetero | W > * | No | |
chr8:125951822 | A | G | Hetero | Y > C | CT26 [mRNA GU441834] | |
chr8:125951717 | G | A | Hetero | W > * | No | |
chr8:125951634 | G | A | Homo | E > K | CT26, B16 (melanoma), RCB0527-Jyg-MC(B) & RCB0526-Jyg-MC(A) (mammary) | |
chr8:125951556 | G | T | Hetero | G > * | RCB0526-Jyg-MC(A) (mammary tumor) | |
chr8:125951208 | G | A | Homo | G > S | CT26 [mRNA GU441834] | |
chr8:125950710 | G | A | Hetero | E > L | RCB0526-Jyg-MC(A) (mammary tumor) | |
chr8:125950284 | G | A | Hetero | G > R | rs30722372 | No |