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Table 3 Eight potential CT26 mutation antigens that are in genes expressed in CT26 and in epitopes predicted to bind MHC class I molecules based on IEDB consensus ranks

From: Immunomic, genomic and transcriptomic characterization of CT26 colorectal carcinoma

Gene Mutation Epitope MHC allele
Csnk1g3 N42K VGPKFRVGKK H-2Dd
E2f8 I522T TYLQPAQAQM H-2Kd
Fam111a G213E CVYGFKEETI H-2Dd
Hdac2 P228S KYYAVNFM H-2Kd
Nudt19 L335F IYMTFPSENK H-2Kd
Phf3 G1814E FPPQNMFEF H-2Dd
Smc3 D733A KFKASRASI H-2Kd
  1. The bold letters signify the mutated amino acid.
  2. dThe official names of mouse MHC alleles.