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Table 1 Candidate genes in TM4

From: Sex-dependent genetic effects on immune responses to a parasitic nematode

Gene symbol

Description

Mb location

LRS

SNP region

Cap1

CAP, adenylate cyclase-associated protein 1

122.53

16.81*

3′ UTR, exon 2, 8 and 10

Mycbp

c-myc binding protein

123.58

16.81*

3′ UTR

Zmpste24

Zinc metallopeptidase, ste24 homolog

120.73

18.45*

3′ UTR, exon 1 and 2

Ppt1

Palmitoyl-protein thioesterase 1

122.51

16.81*

3′ UTR and exon 6

Mtf1

Metal response element binding transcription factor 1

124.47

16.81*

3′ UTR, 5′ UTR, exon 11

Macf1

Microtubule-actin crosslinking factor 1

123.02

16.81*

Exons 1, 9, 10, 19, 20, 35–40, 43–45, 47–48

Zfp69

Zinc finger protein 69

120.6

15.58*

5′ UTR, exons 3, 4 and 6

Smap2

Stromal membrane-associated GTPase-activating protein 2

120.64

15.58*

5′ UTR

Inpp5b

Inositol polyphosphate-5-phosphatase B

124.41

16.81*

Exon 1, 2, 3 and 8

Rspo1

R-spondin homolog

124.66

9.52

Intronic only

  1. *Suggestive LRS = 12.23.