From: Sex specific expression and distribution of small RNAs in papaya
MiRNA family | miR_sequence | Strand | Chromosome | miR location |
---|---|---|---|---|
CpmiR397 | UCAUUGAGUGCAGCGUUGAUGU | - | Supercontig_27 | 1548952..1548973 |
CpmiR398a | UGUGUUCUCAGGUCACCCCUU | + | Supercontig_1 | 1672760..1672780 |
CpmiR398b | UGUGUUCUCAGGUCGCCCCUG | + | Supercontig_34 | 1614486..1614506 |
CpmiR399a | UGCCAAAGGAGAUUUGCCCGG | + | Supercontig_7 | 849330..849350 |
CpmiR399b | UGCCAAAGGAGAUUUGCCCGG | - | Supercontig_7 | 855497..855517 |
CpmiR399c | UGCCAAAGGAGAGUUGCCCUG | + | Supercontig_4 | 3751380..3751400 |
CpmiR403 | UUAGAUUCACGCACAAACUCG | n/a | n/a | n/a |
CpmiR894 | CGUUUCACGUCGGGUUCACC | n/a | n/a | n/a |
CpmiR2111 | UAAUCUGCAUCCUGAGGUUUA | + | Supercontig_171 | 301214..301234 |
CpmiR2910 | UAGUUGGUGGAGCGAUUUGUC | + | Supercontig_0 | 2421938..2421958 |
CpmiR-novel_36 | UGGUCAACUUCACUAAUGCUUU | + | Supercontig_140 | 285663..285642 |
CpmiR-novel_37 | AGAUAAAUCAGAGGAUCUAACC | + | Supercontig_27 | 1714759..1714738 |
CpmiR-novel_38 | UUGCCAUUGCUGUCAUCAUUG | - | Supercontig_26 | 1264911..1264891 |
CpmiR-novel_39 | UUCGCCAGCCAUUCACAAAAU | - | Supercontig_67 | 294009..293989 |
CpmiR-novel_40 | UGCAGUAUCUGUAGCAUCAGC | + | Supercontig_1867 | 3234..3214 |
CpmiR-novel_41 | UUAUGCAGAUACCCGGAGGAG | + | Supercontig_2379 | 8824..8804 |
CpmiR-novel_42 | CAGAGGAGGAGAUGAAGAGGGA | - | Supercontig_609 | 25591..25570 |
CpmiR-novel_43 | UAAGACAAAGCCUACAACAAC | - | Supercontig_92 | 867729..867709 |
CpmiR-novel_44 | UGGGAUCCAGUGCAUUAGUGC | + | Supercontig_241 | 21475..21455 |
CpmiR-novel_45 | AUUGGAGGACUUUGGGGGAGC | - | Supercontig_282 | 4156..4136 |
CpmiR-novel_46 | UCUUGCAAGCUGCUUAGAUCA | - | Supercontig_130 | 392538..392518 |
CpmiR-novel_47 | UUUCUACCCACCUUUACCUCCGUG | - | Supercontig_425 | 30640..30617 |
CpmiR-novel_48 | CAGAAGUAAAGGUUGGUAGAAAA | - | Supercontig_77 | 529407..529385 |
CpmiR-novel_49 | UUUUGGGACACGUGCAGGUAC | + | Supercontig_26 | 75358..75338 |
CpmiR-novel_50 | CUGCGUAUAAAUUUUGCUCCG | + | Supercontig_271 | 79608..79588 |
CpmiR-novel_51 | UUUCCAAAUUCUCUCGUACCGA | + | Supercontig_65 | 875942..875921 |
CpmiR-novel_52 | AGGCGCACUGUGAAUCGUAUUCGG | + | Supercontig_33 | 742481..742458 |
CpmiR-novel_53 | AUCUGGGCCGUCCGUGCGCAC | - | Supercontig_74 | 405778..405758 |
CpmiR-novel_54 | UACCGGACGAAGUAUCGAGACGAU | - | Supercontig_246 | 189341..189318 |