Skip to main content

Table 2 Clade A bZIP and PP2C genes identified and cloned from Canola ( Brassica napus L.)

From: Identification, expression and interaction analyses of calcium-dependent protein kinase (CPK) genes in canola (Brassica napusL.)

Gene

GenBank acc no.

EST count

Arabidopsis ortholog/AGI no.a

length of CDS (bp)

Protein M.W. (kDa)

pI

BnaABF1

JX122892

6

ABF1/At1g49720

1089

39.8

9.137

BnaABF3

JX122893

23

ABF3/At4g34000

1233

45.5

8.699

BnaABF4

JX122894

23

ABF4/At3g19290

1188

43.1

9.639

BnaAREB3

JX122898

21

AREB3/At3g56850

849

31.4

9.245

BnaABI5

KC414029

16

ABI5/At2g36270

1317

46.2

8.96

BnaABI1

JX122895

62

ABI1/At4g26080

1263

46.2

6.696

BnaABI2

JX122896

5

ABI2/At5g57050

1269

46.4

6.093

BnaHAB1

JX122916

36

HAB1/At1g72770

1455

52.6

4.765

BnaHAB2

JX122917

10

HAB2/At1g17550

1539

56.1

4.587

BnaAHG1

KF365484

13

AHG1/At5g51760

1257

45.5

6.101

BnaAHG3

JX122897

86

AHG3/At3g11410

1206

43.3

6.426

BnaHAI1

N/A

7

HAI1/At5g59220

   

BnaHAI2

KF365485

8

HAI2/At1g07430

1311

48.9

6.741

BnaHAI3

KF365487

7

HAI3/At2g29380

1101

40.9

5.902

  1. aThe gene synteny was detected by InParanoid (http://inparanoid.sbc.su.se/cgi-bin/index.cgi).
  2. N/A. cDNA cloning was not successful.