Table 2 Novel miRNA candidates in ‘Jinnan Shiqin’
miRNA ID | Sequence (5′-3′) | Length(nt) | Start/end precursor | Length of precursors(nt) | Arm | MFE (kcal/mol) |
|---|---|---|---|---|---|---|
celery-miR-1 | AAAATCGCTAGGCGGACCAGGGCG | 24 | 66-166 | 101 | 3′ | −19.36 |
celery-miR-4 | ACAGGGGTCCATCACTATTAATAA | 23 | 535-629 | 95 | 5′ | −19.43 |
celery-miR-5 | ACGAATTTAAAGATATTAACAATC | 22 | 263-363 | 101 | 5′ | −18.90 |
celery-miR-7 | ACTGTAGTTTTCATTGGTTTTAC | 23 | 1903-1999 | 97 | 5′ | −20.40 |
celery-miR-9 | AGTGATTGATCTGTTTTGAT | 20 | 207-293 | 87 | 3′ | −23.90 |
celery-miR-14 | CGGAACCAGGATTTTTGATGTCC | 23 | 93-194 | 102 | 5′ | −30.10 |
celery-miR-16 | GAACGGCGTCGGACGGAGCCGCCC | 24 | 499-585 | 87 | 3′ | −26.40 |
celery-miR-17 | GCGGGCTGATCCGGGTTGAAGACA | 24 | 13-107 | 95 | 3′ | −24.70 |
celery-miR-19 | GTTGTTATGTATTCGTTGTTATGA | 24 | 551-645 | 95 | 3′ | −19.43 |
celery-miR-20 | GTTTTACTGCTAGAAGAAATGA | 22 | 3431-3507 | 77 | 5′ | −21.00 |
celery-miR-21 | TAATGCTCTTCGTACTGCATC | 21 | 1089-1186 | 98 | 3′ | −33.50 |
celery-miR-24 | TCCGGATTCTCCTTTTTTTCGAAC | 24 | 9-99 | 91 | 3′ | −19.30 |
celery-miR-27 | TTTAGCTTGAACTATAGATT | 20 | 1522-1617 | 96 | 3′ | −24.90 |