|  | BRAD_only | MAKER_only | Overlap_reciprocal | Overlap_split | Overlap_join | Overlap_total |
---|
100% | Gene | 8,500 | 26,118 | 11,271 | 156 | 2,880 | 32,519 |
 | Exons | 30,121 | 42,416 | 164,479 | 26 | 895 | 176,454 |
75% | Gene | 6,437 | 11,715 | 25,848 | 187 | 2,815 | 34,582 |
 | Exons | 21,838 | 34,590 | 179,737 | 47 | 964 | 184,743 |
50% | Gene | 5,229 | 8,601 | 29,857 | 203 | 2,762 | 35,790 |
 | Exons | 19,385 | 31,639 | 184,909 | 78 | 1,007 | 187,198 |
25% | Gene | 4,239 | 6,544 | 33,617 | 719 | 2,719 | 36,780 |
 | Exons | 18,270 | 30,178 | 187,577 | 347 | 1,039 | 188,313 |
- Four different minimum overlap requirements (expressed as a fraction of the Chiifu reference gene model) used to compare two gene models at both gene level and exon level. The BRAD_only and MAKER_only columns represent features found only in the reference gene model and MAKER generated gene model respectively. Intersections between two gene models mainly include the fraction overlap reciprocal for both (overlap_reciprocal), overlaps that split one reference feature to many MAKER features (overlap_split) or join many reference features to one MAKER feature (overlap_join).