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Table 1 Short read sequence data sets of ferns, liverwort and CGAs

From: A survey of plant and algal genomes and transcriptomes reveals new insights into the evolution and function of the cellulose synthase superfamily

Plant clades

Species

NCBI accessions

# of reads

References

Fern

Pteridium aquilinum

SRX020701

730,579

[34]

Fern

Ceratopteris richardii

SRX154690

1,083,570

-

Liverwort

Marchantia polymorpha

SRX114614- SRX114615

300,372,599a

-

SRX030759- SRX030787

22,854,396

-

CGA: Charophyceae

Chara vulgaris

SRX041525

740,355

[32]

Nitella hyalina

SRX025843

949,065

[30, 31]

CGA: Coleochaetophyceae

Coleochaete orbicularis

SRX017046

354,659

Coleochaete_sp. CFD

TSA contigs

18,386

CGA: Zygnemophyceae

Penium margaritaceum

SRX025845

1,077,311

Spirogyra pratensis

SRX017045

614,139

CGA: Klebsormidiophyceae

Klebsormidium flaccidum

SRX025847

994,649

CGA: Chlorokybophyceae

Chlorokybus atmophyticus

SRX025846

444,743

 

Chaetosphaeridium globosum

SRX025844

884,238

 
  1. aIllumina reads, not used in this study.