Table 4 Intracellular location and bio-types of down-regulated putative gene targets of up-regulated miRNAs
From: Alterations in hepatic miRNA expression during negative energy balance in postpartum dairy cattle
Symbol | Entrez gene name | Location | Type |
|---|---|---|---|
KIAA1191 | KIAA1191 | Cytoplasm | Other |
MIEN 1 | Migration and invasion enhancer 1 | Cytoplasm | Other |
MIS 12 | MIS 12, MIND kinetochore complex component, homolog (S. pombe) | Nucleus | Other |
NR2F1 | Nuclear receptor subfamily 2, group F, member 1 | Nucleus | Ligand-dependent nuclear receptor |
PRSS35 | Protease, serine, 35 | Extracellular space | peptidase |
PTPRR | Protein tyrosine phosphatase, receptor type, R | Plasma membrane | phosphatase |
RNF 128 | Ring finger protein 128, E3 ubiquitin protein ligase | Cytoplasm | Enzyme |
SLC1A4 | Solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 | Plasma membrane | Transporter |
STAMBP | STAM binding protein | Nucleus | Enzyme |
SYBU | Syntabulin (syntaxin-interacting) | Unknown | Other |
TMX1 | Thioredoxin-related transmembrane protein 1 | Cytoplasm | Enzyme |
TPMT | Thiopurine S-methyltransferase | Cytoplasm | Enzyme |
TTR | Transthyretin1 | Cytoplasm | Transporter |
ALDH1A1 | Aldehyde dehydrogenase 1 family, member A1 | Cytoplasm | Enzyme |
BTG1 | B-cell Translocation gene 1, anti-proliferative | Nucleus | Transcription Regulator |
CCL19 | chemokine (C-C motif) ligand 19 | Extracellular space | Cytokine |
CD14 | CD14 molecule | Plasma Membrane | Transmembrane receptor |
CIB1 | Calcium and integrin binding 1 (calmyrin) | Nucleus | Other |
DNAJA1 | DnaJ (Hsp40) homolog, subfamily A, member 1 | Nucleus | Other |
DSG1 | Desmoglein 1 | Plasma membrane | Membrane protein |
EPB4 1Â L5 | Erythrocyte membrane protein band 4.1 like 5 | Plasma membrane | Membrane protein |
ERRFI1 | ERBB receptor feedback inhibitor 1 | Cytoplasm | Other |
FADS2 | Fatty acid desaturase 2 | Plasma membrane | Enzyme |
FOXA3 | Forkhead box A3 | Nucleus | Transcription regulator |
FXR1 | Fragile X mental retardation, autosomal homolog 1 | Cytoplasm | Other |
GKAP1 | G kinase anchoring protein 1 | Cytoplasm | Other |
GNS | Glucosamine (N-acetyl)-6-sulfatase | Cytoplasm | Enzyme |
GPBP1 | GC-rich promoter binding protein 1 | Nucleus | Transcription regulator |
GPR37 | G protein-coupled receptor 37 (endothelin receptor type B-like) | Plasma membrane | G-protein coupled receptor |
HEYL | Hairy/enhancer-of-split related with YRPW motif-like | Nucleus | Transcription regulator |
IP6K2 | Inositol hexakisphosphate kinase 2 | Cytoplasm | Kinase |