Table 2 Melting temperatures (Tm) determined for French-specific canSNP by HRM
canSNP | Region | Allele | Tm values (°C) | Nb strains |
|---|---|---|---|---|
BA15 | Alps | G | 75.16 ± 0.05 | 38 |
Others | A | 74.61 ± 0.07 | 100 | |
BA16 | Pyr | G | 79.93 ± 0.04 | 9 |
Others | A | 79.39 ± 0.08 | 129 | |
BA17 | MCSL | A | 77.27 ± 0.08 | 26 |
Others | G | 77.87 ± 0.13 | 112 | |
BA18 | SL | C | 79.83 ± 0.10 | 6 |
Others | T | 79.13 ± 0.10 | 132 | |
BA19 | France | G | 75.84 ± 0.07 | 73 |
Others | A | 75.22 ± 0.07 | 65 | |
BA20 | Doubs | C | 80.36 ± 0.05 | 21 |
Others | A | 79.83 ± 0.06 | 117 | |
BA21 | CNE | C | 77.90 ± 0.05 | 15 |
Others | A | 77.08 ± 0.08 | 123 | |
BA22 | NE | C | 77.50 ± 0.08 | 10 |
Others | T | 76.93 ± 0.08 | 128 |