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Table 2 Comparison of annotation success between contigs and singletons

From: Transcriptome assembly and microarray construction for Enchytraeus crypticus, a model oligochaete to assess stress response mechanisms derived from soil conditions

 

Annotated

Unannotated

Mean ORF length

  

   Contigs

349

197

   Singletons

226

145

Mean length

  

   Contigs

1,324

874

   Singletons

447

393

Containing start codon (%)

  

   Contigs

84.8

68.5

   Singletons

67.7

49.8

Mean GC-content (%)

  

   Contigs

43.4

37.9

   Singletons

46.9

38.6

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BMC Genomics

ISSN: 1471-2164

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