Strain | ICE type | Integration site (P12) | Pos. LJ | Pos. RJ | Size (kb)14 | Complete T4SS? |
---|---|---|---|---|---|---|
52 | none | Â | Â | Â | Â | Â |
B38 | none2 | Â | Â | Â | Â | Â |
F16 | none | Â | Â | Â | Â | Â |
HPAG1 | none | Â | Â | Â | Â | Â |
Sat464 | none | Â | Â | Â | Â | Â |
v225d | none | Â | Â | Â | Â | Â |
26695 | ICEHptfs33 | hpp12_981 | 1049829 | 473989 | (16.0) | N |
26695 | ICEHptfs4a/4b3 | hpp12_13285 | 1071598 | 464996 | (18.3) | N |
35A | ICEHptfs4a | hpp12_92-91 | 359215 | 309788 | (10.0)15 | N |
51 | ICEHptfs3/4a3 | hpp12_999 | none | 1034232 | (32.2) | N |
83 | ICEHptfs3 | hpp12_65 | 7908512 | 106931 | (27.8) | N |
83 | ICEHptfs4b | hpp12_1495 | 1522267 | 150317212 | (19.1) | N |
908, 2017, 2018 1 | ICEHptfs4a/b4 | hpp12_995-9796 | 99180112 | none | (14.6) | N |
B8 | ICEHptfs3 | hpp12_439-438 | 487322 | 526844 | 39.516 | Y |
B8 | ICEHptfs4a | hpp12_1380-5S-rRNA5,7 | 52870812 | 452245 | (37.0) | N |
Cuz20 | ICEHptfs4b | hpp12_210-211 | 266516 | 227821 | 38.5 | Y |
ELS37 | ICEHptfs3 | hpp12_511-5128 | 884907 | 838572 | 46.3 | Y |
ELS37 | ICEHptfs4b | hpp12_511-5128 | 838326 | none | (2.0) | N |
F30 | ICEHptfs4a | hpp12_92-91 | 1239533 | 1287710 | (10.0)15 | N |
F32 | ICEHptfs3 | hpp12_312-313 | 328469 | 1058181 | (4.1 + 25.5)17 | N |
F57 | ICEHptfs4a | hpp12_92-91 | 152065 | 103732 | (10.0)15 | N |
F57 | ICEHptfs4b | hpp12_259 | 323634 | 284294 | 39.3 | Y |
G27 | ICEHptfs4b | hpp12_1009-1010 | 1085072 | 1045702 | 39.4 | Y |
Gambia 94/24 | ICEHptfs3 | hpp12_15085 | 1473904 | 1521243 | 47.3 | Y |
Gambia 94/24 | ICEHptfs4a/b4 | hpp12_994-5S-rRNA | 106932212 | none | (35.2) | N |
HUP-B14 | ICEHptfs3 | hpp12_1365 | 135565613 | 135565613 | (10.8) | N |
India 7 | ICEHptfs3 | hpp12_599 | 752074 | 798006 | 45.9 | Y |
India 7 | ICEHptfs4a | hpp12_1391-152810 | none | none | (7.3) | N |
J99 | ICEHptfs33 | hpp12_444-445 | 104487813 | 104487813 | (16.7) | N |
J99 | ICEHptfs4a/b4 | hpp12_994-5S-rRNA | none | none | (25.3) | N |
Lithuania 75 | ICEHptfs3 | hpp12_1508 | 1516637 | none | (34.8) | N |
Lithuania 75 | ICEHptfs4c | n.a. (plasmid integration) | 352813 | 352813 | (10.1) | N |
P12 | ICEHptfs3 | hp1354 | 1424780 | 1394778 | (30.0) | N |
P12 | ICEHptfs4a | hp0464 | 452023 | 492769 | 40.7 | Y |
PeCan4 | ICEHptfs3 | hpp12_1528-15235 | 1530039 | 1536824 | (6.8) | N |
PeCan4 | ICEHptfs4a | hpp12_1528-15235, 11 | 1578142 | 1537082 | 41.1 | Y |
PeCan18 | ICEHptfs3 | hpp12_440-439 | 1015120 | 1064481 | 49.416 | Y |
PeCan18 | ICEHptfs4a | hpp12_994-5S-rRNA | 1067535 | none | (3.1) | N |
Puno120 | ICEHptfs3 | hpp12_994-5S-rRNA | 1004976 | none | (6.8 + 26.6)18 | N |
Puno135 | ICEHptfs3/4b3 | hpp12_994-5S-rRNA | 1014870 | 1059997 | (45.1) | Y |
Shi112 | ICEHptfs3 | hpp12_226-225 | 281418 | 232869 | 48.616 | Y |
Shi112 | ICEHptfs4b | hpp12_1380-5S-rRNA | 1412827 | 1451480 | 38.7 | Y |
Shi169 | ICEHptfs4b | hpp12_211-210 | 240310 | 201136 | 39.2 | Y |
Shi417 | ICEHptfs3 | hpp12_1510 | 1546576 | 1591512 | (44.9) | Y |
Shi417 | ICEHptfs4b | hpp12_1126-1125 | 1186887 | 1147709 | 39.2 | Y |
Shi470 | ICEHptfs4b | hpp12_495 | 874710 | 913872 | 39.2 | Y |
SJM180 | ICEHptfs3 | hpp12_454-453 | 1413941 | none | (23.2) | N |
SJM180 | ICEHptfs4a | hpp12_1364-13659 | 1371932 | 141618012 | (24.1) | N |
SNT49 | ICEHptfs4b | hpp12_65 | 61216 | 100646 | 39.4 | Y |
South Africa 7 | ICEHptfs4c | hpp12_1366 | 1568674 | 1527381 | 41.316 | Y |
South Africa 7 | ICEHptfs4b | hpp12_943-944 | 934499 | 973788 | 39.3 | Y |
XZ274 | ICEHptfs4a | hpp12_92-91 | 162178 | 111739 | (10.0)15 | N |
XZ274 | ICEHptfs4b | hpp12_776 | 653446 | 612019 | (41.4)16 | Y |