Skip to main content

Table 2 Distribution of gene expression values among developmental stages examined

From: Deep mRNA sequencing reveals stage-specific transcriptome alterations during microsclerotia development in the smoke tree vascular wilt pathogen, Verticillium dahliae

Sample FPKMa > 0 0 < FPKM < =1 1 < FPKM < =10 10 < FPKM < =100 FPKM > 100
CO 9412 (89.34%b) 1190 (12.64%c) 2879 (30.59%c) 4319 (45.89%c) 1024 (10.88%c)
GC 9443 (89.63%) 1188 (12.58%) 2388 (25.29%) 4805 (50.88%) 1062 (11.25%)
MS1 9747 (92.52%) 929 (9.53%) 2335 (23.96%) 5314 (54.52%) 1169 (11.99%)
MS2 9858 (93.57%) 757 (7.68%) 2202 (22.34%) 5696 (57.78%) 1202 (12.19%)
MS3 9933 (94.29%) 711 (7.16%) 2199 (22.14%) 5756 (57.95%) 1267 (12.76%)
MS4 9939 (94.34%) 672 (6.76%) 2158 (21.71%) 5743 (57.78%) 1366 (13.74%)
  1. aFPKM, fragments per kilobase of transcript per million mapped fragments.
  2. bThe percentage of genes accounting for all annotated genes in V. dahliae (10,535).
  3. cThe percentage of genes accounting for all expressed genes in each library.