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Table 3 GO enrichment terms of significantly regulated genes during MS1-MS4 stages vs stage CO (p value <0.05)

From: Deep mRNA sequencing reveals stage-specific transcriptome alterations during microsclerotia development in the smoke tree vascular wilt pathogen, Verticillium dahliae

Terms FDRa P-value Expression pattern No. genesb
Ribonucleoprotein complex biogenesis (GO:0022613) 0.089519378 0.002883868 up 23
Cellular carbohydrate metabolic process (GO:0044262) 0.132284495 0.006317295 up 25
Cellular component biogenesis (GO:0044085) 0.132284495 0.007286858 up 26
Cellular protein metabolic process(GO:0044267) 0.203232906 0.017429065 up 51
Generation of precursor metabolites and energy (GO:0006091) 0.203232906 0.017982239 up 14
Gene expression (GO:0010467) 0.203232906 0.01894544 up 24
Structural molecule activity (GO:0005198) 3.28E-04 1.39E-06 up 25
Peptidase activity (GO:0008233) 0.022419783 1.90E-04 up 27
Motor activity (GO:0003774) 0.233071632 0.022714608 up 4
Oxidoreductase activity (GO:0016491) 0.263043145 0.02675015 up 64
Protein kinase activity (GO:0004672) 0.332984226 0.038095653 up 15
Hydrolase activity (GO:0016787) 0.351323453 0.041682444 up 88
Transport (GO:0006810) 0.587336379 0.012443567 down 19
Transporter activity (GO:0005215) 0.418960736 0.001775257 down 13
Oxidoreductase activity (GO:0016491) 0.454356181 0.003850476 down 20
  1. aFDR, False discovery rate, adjusted p-value of the test statistics.
  2. bNumber of genes enrichment in each GO terms among the significantly regulated genes.