From: A network-based approach to identify substrate classes of bacterial glycosyltransferases
Locus tag | Current annotation | Proposed annotation | HMM | Evidence | Reference |
---|---|---|---|---|---|
LGG_00279 | welA; dTDP-rhamnosyl transferase rfbF | wclA; glycosyltransferase (putative cell wall polysaccharide biosynthesis) | Sugar transferase | Conservation | Kankainen et al., 2009 [44] |
LGG_00280 | welB; alpha-L-Rha alpha-1,3-L-rhamnosyltransferase | wclB; glycosyltransferase (putative cell wall polysaccharide biosynthesis) | Sugar transferase | Conservation | Kankainen et al., 2009 [44] |
LGG_00281 | welC; alpha-L-Rha alpha-1,3-L-rhamnosyltransferase | wclC; glycosyltransferase (putative cell wall polysaccharide biosynthesis) | Sugar transferase | Conservation | Kankainen et al., 2009 [44] |
LGG_00283* | eps2; hypothetical protein | wclD; putative glycosyltransferase (putative cell wall polysaccharide biosynthesis) | UDP-Glycosyltransferase | - | - |
LGG_00295 | Glycosyltransferase, group 2 | Putative glycosyltransferase | Sugar transferase | Conservation | Kankainen et al., 2009 [44] |
LGG_00348 | yohJ; lipopolysaccharide biosynthesis protein | Putative glycosyltransferase | UDP-Glycosyltransferase | Conservation | Kankainen et al., 2009 [44] |
LGG_00349 | yohH; polyglycerol-phosphate alpha-glucosyltransferase | Putative glycosyltransferase | UDP-Glycosyltransferase | Conservation | Kankainen et al., 2009 [44] |
LGG_00645 | Glycosyltransferase, group 2 | Putative glycosyltransferase | Sugar transferase | Conservation | Kankainen et al., 2009 [44] |
LGG_00695 | gtrB; glycosyltransferase, group 2 | Putative glycosyltransferase | Sugar transferase | Conservation | Kankainen et al., 2009 [44] |
LGG_00794 | pbp1B; penicillin-binding protein 1B | pbpb1B; putative glycosyltransferase, penicillin-binding protein 1B (peptidoglycan biosynthesis) | Pfam/CAZy | Conservation | Kankainen et al., 2009 [44] |
LGG_00825 | rfaG; glycosyltransferase, group 1 | Putative glycosyltransferase | UDP-Glycosyltransferase | Conservation | Kankainen et al., 2009 [44] |
LGG_00826 | cpoA; glycosyltransferase, group 1 | Putative glycosyltransferase | UDP-Glycosyltransferase | Conservation | Kankainen et al., 2009 [44] |
LGG_00928* | yvcK; transporter | Putative glycosyltransferase | Rossmann-fold domains | - | - |
LGG_00985* | Integral membrane protein | Putative glycosyltransferase | Pfam/CAZy | - | - |
LGG_00998 | arbX; lipopolysaccharide biosynthesis glycosyltransferase | Putative glycosyltransferase | Sugar transferase | Conservation | Kankainen et al., 2009 [44] |
LGG_00999 | arbY; lipopolysaccharide biosynthesis glycosyltransferase | Putative glycosyltransferase | Rossmann-fold domains | Conservation | Kankainen et al., 2009 [44] |
LGG_01057 | Glycosyltransferase, group 2 | Putative glycosyltransferase | Sugar transferase | Conservation | Kankainen et al., 2009 [44] |
LGG_01062# | galU; UTP-glucose-1-phosphate uridylyltransferase | UTP-glucose-1-phosphate uridylyltransferase | Sugar transferase | Conservation | Kankainen et al., 2009 [44] |
LGG_01069 | gtrB; glycosyltransferase, group 2 | Putative glycosyltransferase | Sugar transferase | Conservation | Kankainen et al., 2009 [44] |
LGG_01147 | Glycosyltransferase, group 1 | Putative glycosyltransferase | Rossmann-fold domains | Conservation | Kankainen et al., 2009 [44] |
LGG_01195* | metQ; ABC transporter | ABC transporter, putative bifunctional glycosyltransferase | Pfam | - | - |
LGG_01283 | murG; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase | murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (peptidoglycan biosynthesis) | UDP-Glycosyltransferase | Conservation | Mengin-Lecreulx et al., 1991 [26]; Kankainen et al., 2009 [44] |
LGG_01412* | trmFO; tRNA uracil-5-methyltransferase | tRNA uracil −5-methyltransferase, putative bifunctional glycosyltransferase | Rossmann-fold domains | - | - |
LGG_01487 | pbp1A; penicillin-binding protein 1A | pbp1A; putative glycosyltransferase, penicillin-binding protein 1A (peptidoglycan biosynthesis) | Pfam/CAZy | Conservation | Kankainen et al., 2009 [44] |
LGG_01538 | Phage-related glycosyltransferase | Putative glycosyltransferase | Sugar transferase | Conservation | Kankainen et al., 2009 [44] |
LGG_01586 | yohH; glycosyltransferase, group 1 | Putative glycosyltransferase | UDP-Glycosyltransferase | Conservation | Kankainen et al., 2009 [44] |
LGG_01587 | yohJ; glycosyltransferase, group 1 | Putative glycosyltransferase | Rossmann-fold domains | Conservation | Kankainen et al., 2009 [44] |
LGG_01783 | pbp2A; membrane carboxypeptidase, penicillin-binding protein 2A | pbp2A; bifunctional membrane carboxypeptidase, putative glycosyltransferase, penicillin-binding protein 2A (peptidoglycan biosynthesis) | Pfam/CAZy | Conservation | |
LGG_01991* | UDP-N-acetylglucosamine 2-epimerase | Epimerase, putative bifunctional glycosyltransferase | UDP-Glycosyltransferase | - | - |
LGG_01992* | UDP-N-acetylglucosamine 2-epimerase | Epimerase, putative bifunctional glycosyltransferase | Sugar transferase | - | - |
LGG_01999 | rmlA; glucose-1-phosphate thymidylyltransferase | rmlA; glucose-1-phosphate thymidylyltransferase | Sugar transferase | Conservation | Kankainen et al., 2009 [44] |
LGG_02004 | eps3; sugar or lipopolysaccharide synthesis transferase | Putative glycosyltransferase | Pfam | Conservation | Kankainen et al., 2009 [44] |
LGG_02023# | glgP; glycogen starch alpha-glucan phosphorylase | glgP, glycogen alpha-glucan phosphorylase | UDP-Glycosyltransferase | Conservation | Kankainen et al., 2009 [44] |
LGG_02024 | glgA; glycogen synthase | glgA; glycogen synthase (glycogen biosynthesis) | UDP-Glycosyltransferase | Conservation | |
LGG_02025# | glgD; glucose-1-phosphate adenylyltransferase | glgD; glucose-1-phosphate adenylyltransferase (glycogen biosynthesis) | Sugar transferase | Conservation | |
LGG_02026# | glgC; glucose-1-phosphate adenylyltransferase | glgC; glucose-1-phosphate adenylyltransferase (glycogen biosynthesis) | Sugar transferase | Conservation | |
LGG_02040$ | rmlA1; glucose-1-phosphate thymidyl transferase | rmlA1; glucose-1-phosphate thymidyl transferase | Sugar transferase | Conservation | Kankainen et al., 2009 [44] |
LGG_02042 | rmlA2; glucose-1-phosphate thymidylyltransferase | rmlA2; glucose-1-phosphate thymidylyltransferase | Sugar transferase | Conservation | Kankainen et al., 2009 [44] |
LGG_02043 | welE; undecaprenyl-phosphate beta-glucosephosphotransferase | welE; priming glycosyltransferase (galactose-rich EPS biosynthesis) | Pfam | Experimental validation | Lebeer et al., 2009 [37] |
LGG_02044 | welF; glycosyltransferase, group 1 | welF; putative glycosyltransferase (galactose-rich EPS biosynthesis) | UDP-Glycosyltransferase | Conservation | Kankainen et al., 2009 [44] |
LGG_02045 | welG; glycosyltransferase, galactofuranosyltransferase | welG; putative glycosyltransferase (galactose-rich EPS biosynthesis) | UDP-Glycosyltransferase | Conservation | Kankainen et al., 2009 [44] |
LGG_02046 | welH; alpha-L-Rha alpha-1,3-L-rhamnosyltransferase | welH; putative glycoysltransferase (galactose-rich EPS biosynthesis) | Sugar transferase | Conservation | Kankainen et al., 2009 [44] |
LGG_02047 | welI; glycosyltransferase, group 1 | welI; glycosyltransferase (galactose-rich EPS biosynthesis) | UDP-Glycosyltransferase | Experimental validation | This work |
LGG_02284 | Glycosyltransferase, group 1 | Putative glycosyltransferase | UDP-Glycosyltransferase | Conservation | Kankainen et al., 2009 [44] |
LGG_02285 | yohH; glycosyltransferase, group 1 | Putative glycosyltransferase | UDP-Glycosyltransferase | Conservation | Kankainen et al., 2009 [44] |
LGG_02347* | Hypothetical protein | Putative glycosyltransferase | Pfam | - | - |
LGG_02562# | glmU; UDP-N-acetylglucosamine pyrophosphorylase | UDP-N-acetylglucosamine pyrophosphorylase | Sugar transferase | Conservation | Kankainen et al., 2009 [44] |
LGG_02869 | Glycosyltransferase, group 1 | Putative glycosyltransferase | UDP-Glycosyltransferase | Conservation | Kankainen et al., 2009 [44] |