A novel model of double replications and random loss accounts for rearrangements in the Mitogenome of Samariscus latus (Teleostei: Pleuronectiformes)

Table 1 Organization of S. latus mitochondrial genome

	From	To	Size		Anticodon	Start	Stop	Strand	Intergenic
	From	To	bp	aa	Anticodon	Codon	Codon	Strand	Region
tRNA^Phe (F)	1	68	68		GAA			H	0
12 s rRNA	69	1020	952					H	0
tRNA^Val (V)	1021	1092	72		TAC			H	0
16 s rRNA	1093	2805	1713					H	0
tRNA^Leu1 (L1)	2806	2879	74		TAA			H	0
ND1	2880	3854	975	325		ATG	TAA	H	3
tRNA^Ile (I)	3858	3927	70		GAT			H	-2
tRNA^Gln (Q)	3926	3997	72		TTG			L	0
CR1	3998	4890	893					H	1
tRNA^Cys (C)	4892	4958	67		GCA			L	0
tRNA^Tyr (Y)	4959	5026	68		GTA			L	80
tRNA^Ser1 (S1)	5107	5177	71		TGA			L	85
tRNA^Lys (K)	5263	5337	75		TTT			H	43
tRNA^Arg (R)	5381	5450	70		TCG			H	88
tRNA^Ser2 (S2)	5539	5605	67		GCT			H	75
ND5	5681	7519	1839	613		ATG	TAG	H	-4
ND6	7516	8037	522	174		ATG	TAG	L	0
tRNA^Glu (E)	8038	8106	69		TTC			L	4
CYTB	8111	9251	1141	380		ATG	T	H	0
tRNA^Thr (T)	9252	9321	70		TGT			H	86
tRNA^Met (M)	9408	9476	69		CAT			H	0
ND2	9477	10521	1045	348		ATG	T	H	0
tRNA^Trp (W)	10522	10591	70		TCA			H	1
tRNA^Ala (A)	10593	10660	68		TGC			L	1
tRNA^Asn (N)	10662	10734	73		GTT			L	59
COI	10794	12344	1551	517			TAA	H	22
tRNA^Asp (D)	12367	12434	68		GTC	GTG		H	5
COII	12440	13138	699	233		ATG	AGA	H	62
ATP8	13201	13368	168	56		ATG	TAA	H	-10
ATP6	13359	14042	684	228		ATG	TAA	H	-1
COIII	14042	14827	786	262		ATG	TAA	H	-1
tRNA^Gly (G)	14827	14896	70		TCC			H	0
ND3	14897	15247	351	117		ATG	TAA	H	70
ND4L	15318	15614	297	99		ATG	TAA	H	-7
ND4	15608	16981	1374	458		ATG	AGA	H	7
tRNA^His (H)	16989	17057	69		GTG			H	16
tRNA^Leu2 (L2)	17074	17147	74		TAG			H	0
CR2	17148	18046	899					H	0
tRNA^Cys’ (C’)	18047	18113	67		GCA			L	0
tRNA^Tyr’ (Y’)	18114	18181	68		GTA			L	78
tRNA^pro (P)	18260	18330	71		TGG			L	0
NC	18331	18706	376					H	0

CR1, CR2: control region 1 and control region 2. NC: noncoding region. tRNA^Leu1: tRNA^Leu(TAA); tRNA^Leu2: tRNA^Leu(TAG); tRNA^Ser1: tRNA^Ser(TGA); tRNA^Ser2: tRNA^Ser(GCT); tRNA^Cys’ (C’), tRNA^Tyr’ (Y’): a copy of tRNA^Cys and tRNA^Tyr. Intergenic spacers are located between the feature on the same line and that on the following line; a negative number indicates an overlap.

ISSN: 1471-2164