Genomic coverage and quality of sequencing reads. Average fold genomic coverage for the various strains is plotted as indicated. Bar color reflects the Illumina read length used as indicated in the legend. In the Table in the lower half the percentage of the genome covered at least 10-fold is shown as percentage of the complete GT1 reference genome (in all cases over 99.5%). Read quality is reported as the mismatch rate between reads and the reference genome. n-F-P2 [n = new] is a re-sequenced sample of the F-P2 mutant with longer read length , named o-F-P2 [o = old].