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Table 2 A summary of identified high-quality SNVs (coverage > 8) between, DA/K and DA/O, DA/K and PVG and DA/O and E3 and the distribution of SNVs across genomic features

From: Identification of candidate risk gene variations by whole-genome sequence analysis of four rat strains commonly used in inflammation research

  DA/O≠DA/K DA/O≠E3 DA/K≠PVG DA/O+/K≠E3=PVG BN≠DA/O+/K+E3+PVG
Stop gained 1 48 37 22 10
Stop lost 0 3 2 1 2
Non-synonymous 108 3688 3374 1628 1437
Synonymous 224 7398 7546 3193 2770
Essential splice site 1 41 36 23 20
splice site 21 1013 973 451 401
5’prime UTR 21 644 692 270 231
3’ prime UTR 113 4761 4481 2029 1860
Intronic 13949 436591 347893 180040 171296
Uppstream 1322 49342 40423 19954 18148
Downstream 1215 41414 34053 16472 14919