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Table 3 List of selected enzymes involved in the jasmonic acid biosynthesis and signaling

From: RNA sequencing on Solanum lycopersicum trichomes identifies transcription factors that activate terpene synthase promoters

Abbreviation Contig Nr SGN Nr Annotation Transcript length (bases) Expression values JA* Expression values C* Fold JA induction
LOXAa 6402 SGN-U592535 Lipoxygenase A 2837 35.2 1.6 22
AOCa 24817 SGN-U562649 Allene oxide cyclase 1645 1898.8 417.6 4.5
JAZ1b 6863 SGN-U579837 Jasmonate ZIM-domain 1 1156 12.2 0.7 17.4
JAZ3c 20751 SGN-U564446 Jasmonate ZIM-domain 3 986 18.87 2.3 8.2
COI1a 24353 SGN-U568988 Coronatine-insensitive 1 2260 11 8.5 1.29
  1. a[38]: LOXA (U09026), AOC (AW624058), COI1 (NM_001247535), b[39]: JAZ1 (EF591123), c[40]: JAZ3 (EU194561).
  2. *Expression values are in RPKM (reads per kilobase of transcript per million mapped reads).