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Table 6 List of selected S. lycopersicum transcription factors (TF) potentially involved in terpene biosynthesis

From: RNA sequencing on Solanum lycopersicum trichomes identifies transcription factors that activate terpene synthase promoters

Name Contig nr SGN nr Annotation Transcript length (bases) Expression values JA* Expression values C* Fold JA induction
SlAP2_9 83 SGN-U572361 ERF (ethylene response factor) subfamily B-3 of ERF/AP2 TF family 371 9.69 4.08 2.37
SlAP2_2 1719 SGN-U596590 DREB subfamily A-1 of ERF/AP2 TF family 422 13.6 1.95 6.97
SlAP2_6 5289 SGN-U563871 AP2 domain-containing TF 933 45.39 12.78 3.55
SlAP2_3 7031 SGN-U563215 DREB subfamily A-1 of ERF/AP2 TF family 981 5.95 1.42 4.19
SlAP2_7 7865 SGN-U587768 DREB subfamily A-4 of ERF/AP2 TF family 775 2.2 0.71 3.09
SlAP2_4 10714 SGN-U586437 ERF (ethylene response factor) subfamily B-3 of ERF/AP2 TF family 611 2.72 0.71 3.83
SlAP2_10 14672 SGN-U585539 AP2 domain-containing TF 297 18.87 7.99 2.36
SlAP2_5 16204 SGN-U577088 ERF (ethylene response factor) subfamily B-4 of ERF/AP2 TF family 523 0.68 0.18 3.78
SlAP2_11 25582 SGN-U584756 ERF (ethylene response factor) subfamily B-2 of ERF/AP2 TF 660 1.19 0.53 2.24
SlAP2_1 25985 SGN-U586438 ERF (ethylene response factor) subfamily B-3 of ERF/AP2 TF family 942 16.32 0.53 30.8
SlAP2_8 26482 SGN-U581852 Ethylene-responsive element-binding factor 4 homolog 788 58.81 24.32 2.42
SlWRKY22 9827 SGN-U565154 WRKY family TF 1366 0.68 0.18 3.78
SlWRKY28 10561 SGN-U584367 WRKY family TF 1326 0.5 0.18 2.78
SlWRKY78 13200 SGN-U565157 WRKY family TF 1099 1.19 0.18 6.61
SlWRKY73 20918 SGN-U571278 WRKY family TF 1453 0.5 0.18 2.78
SlMYC1 24332 SGN-U576396 MYC TF 2174 32.47 22.7 1.43
  1. *Expression values are in RPKM (reads per kilobase of transcript per million mapped reads).