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Table 2 Amino acid sequence characteristics of BoCBF genes

From: Genome-wide analysis of the distribution of AP2/ERF transcription factors reveals duplication and CBFs genes elucidate their potential function in Brassica oleracea

Gene ID Sequenced ID ( Bol base) TAIR homology (aa) (%Id) Nt (bp) length Chr. no., position aa length pI Mol. wt(kDa) α-helix (%) β- sheet (%) NLS Subcellular localization
Monopartite Bipartite
BoCBF1a Bol029967 AT4G25490 (68) 645 C03; 49752542–49753186 (-) 214 5.03 23.77 32.71 7.94 65-79 - n/13.0
BoCBF1b Bol006459 AT4G25490 (59) 753 Cun; 000278: 15959–16711 (-) 250 4.85 27.86 30.80 11.20 64-78 33-60, 196-228 n/12.0
BoCBF2 Bol042239 AT4G25470 (62) 648 C07; 43885424–43886071 (-) 215 5.34 23.82 30.23 10.23 66-80 - n/11.0
BoCBF3 Bol006460 AT4G25480 (50) 834 Cun; 000278: 49871-50704 277 4.58 30.45 36.10 9.75 68-82 224-255 n/10.0
BoCBF4 Bol029422 AT5G51990 (68) 663 C09; 18733153-18732491 220 6.14 24.51 35.45 9.09 40-49, 69-83 - n/12.0
  1. aa- amino acid; NLS- nuclear localization signal; n- nucleus.
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BMC Genomics

ISSN: 1471-2164

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