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Table 2 Comparison of the number of genes involved in the anthocyanin biosynthetic pathways in B. rapa and A. thaliana

From: Anthocyanin biosynthetic genes in Brassica rapa

 

A. thaliana a

B. rapa

Pvalueb

Syntenic orthologs

Non-syntenic orthologs

Structural genes

24(1)

41

5

0.3992

Regulatory genes

16(1)

24

1

1

Transport genes

1

2

0

1

Total

41(2)

67

6

0.4414

  1. aNumbers in brackets refer to genes that have no orthologs in B. rapa.
  2. bThe proportion of total A. thaliana and B. rapa genes was used as a background to calculate the P-value using Fisher’s test. A P-value more than 0.05 indicates that the proportion of anthocyanin biosynthesis genes between A. thaliana and B. rapa was not significantly different from the background.
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BMC Genomics

ISSN: 1471-2164

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