Figure 3

Traits showing a significant increase or decrease in the variance explained for each of the annotation classes tested, compared with the same number of randomly chosen SNP. This analysis was replicated 5 times, with significance determine as greater or less than the average of the proportion of variance explained by the randomly chosen SNP +/− 2 times the standard error. Blue bars indicate a significant increase in the variance explained than the same number of randomly chosen intergenic SNPs. Orange bars indicate a depletion in the variance explained for that class.