Figure 7
From: Nucleosome organization in the vicinity of transcription factor binding sites in the human genome
Clustering nucleosome signals around all TF binding sites. (A) Nucleosome occupancy clusters identified using CAGT in the GM12878 cell line. The first panel was a traditional aggregate plot of the nucleosome occupancy signals for all TFBSs. The second and third panels were traditional aggregate plots for TFBSs with high and low nucleosome signals. The rest of the panels exhibited the nucleosome signals averaged over the sites in each of the clusters, and the proportion of binding sites in each cluster was given in the header. (B) Nucleosome occupancy clusters identified using CAGT in the K562 cell line.