Figure 9

Condition specificity of co-enrichment at ncRNA genes. (A) Each row is a TF, and experimental conditions for that TF are plotted on the same row with letters indicating the condition. Conditions are: “Y”, rich media; “S”, sulfometuron methyl; “R”, rapamycin; “H”, hydrogen peroxide; “1”, 1-butanol; “A”, succinic acid; “G”, galactose; “V”, vitamin deprived medium; “M”, alpha mating factor; “F”, raffinose; and “P”, phosphate deprived medium. ChIP enrichment at ncRNA genes is expressed as the difference between the mean log₂ fold enrichment of ncRNA gene probes and the mean log₂ fold enrichment of all other probes. (B) Leu3p, Ste12p, and Mot3p enrichment at ncRNA genes in rich media vs. sulfometuron methyl treatment. For each factor and condition, an empirical cumulative distribution function is shown contrasting the distribution in log₂ fold enrichment (FE) for ncRNA gene probes and all other probes.