Table 2 LSBL values for the AIMs considered in the different SNP panels and when considering HapMap populations
From: Evaluating the accuracy of AIM panels at quantifying genome ancestry
Accumulated LSBL | Average LSBL | |||||
|---|---|---|---|---|---|---|
Panel ID | AFR | ASI | EUR | AFR | ASI | EUR |
HapMap | 143264.06 | 91184.56 | 50587.85 | 0.037 | 0.024 | 0.013 |
GAL | 71.08 | 23.35 | 46.67 | 0.159 | 0.052 | 0.105 |
ILU | 37.11 | 29.82 | 17.28 | 0.120 | 0.096 | 0.056 |
HAL | 13.21 | 13.90 | 5.66 | 0.084 | 0.089 | 0.036 |
KOS | 14.18 | 7.41 | 9.08 | 0.111 | 0.058 | 0.071 |
NAS | 12.87 | 6.32 | 6.58 | 0.138 | 0.068 | 0.071 |
PHI | 3.29 | 3.08 | 3.66 | 0.122 | 0.077 | 0.136 |
COR | 4.96 | 2.41 | 1.74 | 0.216 | 0.105 | 0.076 |
LAO | 1.31 | 1.30 | 0.56 | 0.131 | 0.130 | 0.056 |
Present study (595 SNPs) | 98.38 | 98.40 | 98.35 | 0.165 | 0.165 | 0.165 |