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Table 2 Named genes up-regulated in ≥2.4-fold the white muscle

From: Differential gene expression in small and large rainbow trout derived from two seasonal spawning groups

Gene name

Gene number

Fold change*

p-value†

Large Sept. fish

   

Max protein

A_05_P478412

5.618

4.14E-03

DNA-damage-inducible transcript 4-like protein

A_05_P249334

5.128

9.71E-04

ADP/ATP translocase 2

A_05_P276614

4.000

8.42E-03

Complement C1q-like protein 4 precursor

A_05_P332842

3.891

9.94E-03

HIG1 domain family member 2a

A_05_P433247

2.801

3.92E-02

Polycystic kidney disease protein 1-like 3 precursor

A_05_P299292

2.717

7.16E-03

C-type lectin

A_05_P249684

2.646

1.13E-02

Fibrinogen gamma chain

A_05_P480537

2.625

3.06E-02

Fibrinogen gamma chain

A_05_P364872

2.584

3.24E-02

40s ribosomal protein s30

A_05_P377337

2.558

7.26E-03

Cathepsin m precursor

A_05_P251889

2.525

8.39E-03

Fibrinogen alpha chain

A_05_P332052

2.506

1.24E-02

Beta-enolase-like isoform 1

A_05_P482637

2.500

4.06E-02

Retinol-binding protein 2

A_05_P254734

2.481

2.03E-02

Fibrinogen gamma chain

A_05_P464657

2.463

1.82E-02

Trichohyalin

A_05_P439982

2.433

2.17E-02

Complement C1q-like protein 2 precursor

A_05_P252174

2.404

1.23E-02

Small Sept. fish

   

Parvalbumin 2

A_05_P423182

6.722

8.14E-04

Calcium-binding and coiled-coil domain-containing protein 1 isoform 2

A_05_P276634

5.305

3.25E-05

Parvalbumin beta-2

A_05_P429727

3.595

1.67E-03

Glyceraldehyde-3-phosphate dehydrogenase

A_05_P419277

3.542

1.31E-04

Thrombospondin 2

A_05_P322687

3.014

2.58E-02

Calcium binding and coiled-coil domain like

A_05_P276654

2.971

8.67E-04

Myosin heavy chain

A_05_P393052

2.682

1.37E-02

Alpha actin

A_05_P449267

2.550

9.65E-04

Large Dec. fish

   

Fibrinogen gamma polypeptide

A_05_P450362

25.126

1.71E-02

C1 inhibitor

A_05_P475617

4.717

3.85E-02

HIG1 domain family member 2a

A_05_P368647

4.049

3.85E-02

mgc82112 protein

A_05_P250149

3.831

2.60E-02

Transcription factor jun-b

A_05_P266894

3.759

3.03E-02

Butyrate response factor 1

A_05_P376337

3.559

1.17E-02

Fucolectin-4 precursor

A_05_P463327

3.436

4.43E-02

Iron zinc purple acid phosphatase-like

A_05_P411342

3.344

4.52E-02

Transketolase

A_05_P414317

3.333

4.38E-02

Lysosome membrane protein 2-like

A_05_P413782

3.247

3.45E-02

Lactate dehydrogenase b

A_05_P444697

3.115

4.38E-02

Eukaryotic translation elongation factor 1 alpha 1

A_05_P362822

2.976

3.11E-02

Acidic mammalian chitinase-like

A_05_P391302

2.941

3.58E-02

Growth arrest and dna-damage- beta

A_05_P409552

2.841

1.08E-02

Lipoprotein lipase

A_05_P429962

2.778

1.58E-02

Neutral alpha-glucosidase ab-like

A_05_P259469

2.688

3.22E-02

Max protein

A_05_P478412

2.681

2.36E-02

Metallothionein

A_05_P249474

2.674

2.70E-02

Delta-6 fatty acyl desaturase

A_05_P248839

2.653

4.06E-02

Flavin reductase

A_05_P418547

2.632

2.75E-02

Eukaryotic translation elongation factor 1 alpha 1

A_05_P449262

2.618

3.06E-02

Lctacalcin

A_05_P488907

2.611

1.49E-02

Liver-expressed antimicrobial peptide 2

A_05_P475047

2.571

3.33E-02

BolA-like protein 2

A_05_P336112

2.564

1.38E-02

Annexin a1

A_05_P287152

2.506

1.91E-02

Cathepsin d

A_05_P251434

2.500

1.02E-02

Purine nucleoside phosphorylase

A_05_P415112

2.494

2.04E-02

Eukaryotic translation elongation factor 1 alpha 1

A_05_P454907

2.488

3.53E-02

Heat shock protein 90

A_05_P249734

2.457

3.06E-02

Litaf-like protein

A_05_P486262

2.457

4.47E-02

Alpha actin

A_05_P423987

2.451

1.28E-02

Xylose isomerise

A_05_P277217

2.439

1.64E-02

Middle subunit

A_05_P434332

2.427

3.47E-02

Uncharacterized protein C8orf4 homolog

A_05_P262634

2.410

2.26E-02

Small Dec. fish

   

rRNA promoter binding protein

A_05_P425972

5.474

7.07E-03

Myosin light chain 3-like

A_05_P248844

4.690

1.29E-03

Myosin heavy chain

A_05_P277167

4.167

3.87E-03

rRNA promoter binding protein

A_05_P393707

3.572

9.75E-04

Tropomyosin 2

A_05_P488277

3.453

2.01E-02

Troponin T, cardiac muscle

A_05_P255254

3.386

1.04E-02

Troponin slow skeletal muscle

A_05_P277927

3.332

7.86E-03

Tropomyosin 3

A_05_P377692

3.075

1.33E-02

Parvalbumin 2

A_05_P423182

3.032

3.13E-02

Parvalbumin beta-2

A_05_P429727

2.982

1.82E-02

Eukaryotic translation elongation factor 1 epsilon 1

A_05_P468757

2.899

4.73E-03

Tropomyosin partial

A_05_P336882

2.894

7.12E-03

Senescence-associated protein

A_05_P262709

2.819

1.64E-03

Myosin binding protein cardiac

A_05_P277492

2.688

3.53E-03

Keratin-associated protein 10-4

A_05_P485782

2.441

3.35E-03

  1. *Fold change is the average difference in expression as measured by the microarray.
  2. †Measures the significance of the difference in expression between the small and large fish.