Dual transcriptomics of virus-host interactions: comparing two Pacific oyster families presenting contrasted susceptibility to ostreid herpesvirus 1

Table 4 List of oyster genes targeted by real time PCR

GenBank	EST name	Abbreviation	Forward primer	Efficiency (%)	Primer reference
			Reverse primer
DQ530619	Myeloid differentiation factor 88	MyD88	CGTGCCATGGACGGATAACAACG	97.5	[20]
DQ530619	Myeloid differentiation factor 88	MyD88	GGCCCAGCAGTACCTCTGTGGAATC	97.5	[20]
AM856743	NF-Kappa-B-inhibitor cactus	IkB2	CAGCATTCACTGACGACGAT	104	[14]
AM856743	NF-Kappa-B-inhibitor cactus	IkB2	TCTGCCTCAGTTTGTCGTTG	104	[14]
FJ440108	Interferon Induced Protein 44	IFI44	TGGTGGACTATGGACCGGACAGTG	93.8
FJ440108	Interferon Induced Protein 44	IFI44	GGTAGACAGTGGTGAGGCTGTGCT	93.8
EU678311	Glypican	Gly	AACTACTGCCTCAACACCATGAA	102.1
EU678311	Glypican	Gly	TAGGTGTCACCAACAGAACCAC	102.1
JH818926	Baculoviral IAP repeat-containing protein 2	IAP	CCCGAAAACGTAACCTCAGA	103	Barbosa-Solomieu et al., pers com
JH818926	Baculoviral IAP repeat-containing protein 2	IAP	TTTCGTTTGCTGCTCATTTG	103	Barbosa-Solomieu et al., pers com
AB122066	Elongation Factor	EF	AGTCACCAAGGCTGCACAGAAAG	98.8
			TCCGACGTATTTCTTTGCGATGT

ISSN: 1471-2164