Table 2 Statistics of plasmid alignment results in the two strains
Strain Name | Scaffold | Length (bp) | Coverage (%) | Plasmid ID | Length (bp) | Coverage (%) | Annotation |
|---|---|---|---|---|---|---|---|
LCT-KP214 | Scaffold2 | 192,758 | 74.85 | NC_019390.1 | 207,819 | 70.06 | Klebsiella pneumoniae plasmid pKPN_CZ |
LCT-KP214 | Scaffold4 | 90,588 | 84.83 | NC_009133.1 | 94,289 | 80.17 | Escherichia coli plasmid NR1 |
LCT-KP214 | Scaffold3 | 165,023 | 75.04 | NC_019158.1 | 137,813 | 87.54 | Klebsiella pneumoniae plasmid pNDM10469 |
LCT-KP289 | Scaffold2 | 193,508 | 74.70 | NC_019390.1 | 207,819 | 70.14 | Klebsiella pneumoniae plasmid pKPN_CZ |
LCT-KP289 | Scaffold3 | 164,884 | 75.65 | NC_019153.1 | 162,746 | 74.62 | Klebsiella pneumoniae plasmid pNDM-KN |
LCT-KP289 | Scaffold4 | 98,792 | 82.67 | NC_009133.1 | 94,289 | 80.26 | Escherichia coli plasmid NR1 |
LCT-KP289 | Scaffold7 | 2,242 | 100.00 | NC_015599.1 | 54,205 | 4.14 | Escherichia coli IncN plasmid N3 |
LCT-KP289 | Scaffold8 | 1,359 | 96.17 | NC_004604.2 | 53,865 | 2.43 | Bacillus megaterium QM B1551 plasmid pBM400 |
LCT-KP289 | Scaffold9 | 1,154 | 99.13 | NC_016009.1 | 19,557 | 5.85 | Enterococcus faecium plasmid pM7M2 |
LCT-KP289 | Scaffold10 | 950 | 98.53 | NC_013317.1 | 21,806 | 4.29 | Enterococcus faecium plasmid p5753cA |