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Figure 3 | BMC Genomics

Figure 3

From: Systematic permutation testing in GWAS pathway analyses: identification of genetic networks in dilated cardiomyopathy and ulcerative colitis

Figure 3

Overview on the 20 significant pathways across all approaches (Figure 3A), in both permutation tests (Figure 3B) and just in original calculations (Figure 3 C). The figure presents the significance values for the 20 pathways (ordered clockwise according to decreasing significance as calculated by the Hypergeometric test), showing p-values < 0.05 for all three approaches. The further away from the middle the higher the significance scores (on a logarithmic scale). The grey shaded area in the middle corresponds to non-significant pathways. Significance values have been cut at 10-5.

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