Table 3 Cross reference of PmNV genes that have homologs in the nudiviruses (OrNV, GbNV, HzNV-1 and HzNV-2), bracoviruses (CcBV and CiBV), hytrosaviruses (MdSGHV and GpSGHV)
Function | Gene name | Nudivirus | ORF/aa PmNV | Bracoviruses and hytrosaviruses | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
ORF (aa% identity/similarity) | Accecssion no./ORF (aa% identity/similarity) | |||||||||
OrNV | GbNV | HzNV-1 | HzNV-2 | CcBV | CiBV | MdSGHV | GpSGHV | |||
Replication | DNA excision and repair | 16 (11/25) | 65 (12/25) | 68 (9/19) | 70 (9/19) | 20/423 | NA | NA | 76 (12/25) | - |
integrase | 75 (20/39) | 57 (21/39) | 144 (25/43) | 8 (25/43) | 55/306 | CAR40240 (21/39) | NA | - | - | |
*helicase 2 | 108 (5/18) | 46 (8/25) | 60 (16/32) | 76 (16/32) | 76/576 | NA | NA | 104 (6/19) | 074 (7/23) | |
*helicase 2 | 108 (6/20) | 46 (8/22) | 60 (14/30) | 76 (14/30) | 79/715 | NA | NA | 104 (6/19) | 074 (7/23) | |
Structural protein | PmV-like | - | - | 118 (9/22) | 30 (9/24) | 45/248 | CAR31589 (15/29) | CAR40204 (15/32) | 100 (8/17) | - |
**HzNVORF106-like | 3 (7/21) | 13 (9/25) | 106 (14/30) | 37 (9/25) | 69/328 | CAR31586 (12/30) | CAR40201 (14/29) | - | - | |
**HzNVORF140-like | - | - | 140 (14/30) | 11 (7/14) | 90/240 | CAR31588 (17/37) | CAR40203 (6/13) | - | - | |
**HzNVORF9-like | - | - | 9 (14/30) | 109 (20/41) | 107/235 | CAR31582 (21/44) | CAR40198 (18/42) | - | - | |
Other known and unknown functions | 31 K structural protein | - | - | 89 (13/31) | 52 (13/31) | 22/310 | CAR31585 (17/33) | CAR40200 (18/32) | - | - |
p51 | - | - | 64 (15/38) | 73 (15/38) | 24/397 | CAR31584 (16/39) | NA | - | - | |
Guanosine monophosphate kinase | 117 (12/28) | 34 (12/31) | 111 (19/40) | 34 (19/40) | 38/314 | NA | NA | - | - | |
**HzNVORF128-like | - | - | 128 (6/22) | 21 (6/22) | 42/616 | CAR31587 (7/21) | CAR40202 (3/9) | - | - | |
thymidylate kinase | 125 (12/22) | 44 (15/31) | 115 (14/30) | 32 (10/25) | 46/338 | NA | NA | - | - | |
DNA ligase-like | 131 (3/9) | 74 (5/15) | 141 (14/30) | 10 (14/30) | 48/590 | NA | NA | - | - | |
orf9 (HzNV2) | 76 (32/58) | 58 (10/30) | 143 (14/30) | 9 (29/57) | 53/54 | NA | NA | - | - | |
thymidylate kinase | 137 (14/27) | 17 (14/29) | 51 (16/31) | 85 (16/33) | 65/437 | NA | NA | - | - | |
orf84 (HzNV-2) | - | - | 52 (14/30) | 84 (6/12) | 66/416 | NA | NA | - | - | |
**HzNVORF100 | - | - | 100 (14/30) | 41 (15/34) | 78/219 | NA | NA | - | - | |
esterase/lipase | 47 (16/30) | 19 (12/30) | 30 (17/38) | 99 (17/38) | 98/277 | NA | NA | - | - | |
microtubule-associated-like | 18 (11/29) | 67 (14/31) | 122 (14/30) | 27 (13/30) | 99/414 | NA | NA | - | - | |
11 K virion structural protein | 41 (30/46) | 95 (13/35) | 124 (18/42) | 25 (18/42) | 100/101 | NA | NA | - | - | |
**HzNVORF28-like | - | - | 28 (14/30) | 101 (14/28) | 108/243 | NA | NA | - | - | |