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Table 2 Comparison of male versus female up-regulated gene functions

From: The sex-specific transcriptome of the hermaphrodite sparid sharpsnout seabream (Diplodus puntazzo)

GO-ID

GO-Term

FDR

P-Value

Females seq. count

Males seq. count

Over-represented

GO:0006412

translation

7.8537E-48

9.13693E-51

186

6

females

GO:0008152

metabolic process

3.14977E-46

4.07157E-49

1707

1184

females

GO:0022613

ribonucleoprotein complex biogenesis

3.00773E-35

7.77593E-38

123

1

females

GO:0071704

organic substance metabolic process

2.96565E-34

8.05049E-37

1497

1058

females

GO:0044237

cellular metabolic process

5.57895E-34

1.58657E-36

1392

959

females

GO:0010467

gene expression

7.71755E-34

2.29451E-36

549

240

females

GO:0042254

ribosome biogenesis

1.02323E-31

3.3067E-34

106

0

females

GO:0044238

primary metabolic process

1.6642E-31

5.80837E-34

1445

1028

females

GO:0006396

RNA processing

3.75931E-31

1.40926E-33

146

11

females

GO:0043170

macromolecule metabolic process

1.84976E-26

9.08619E-29

1119

758

females

GO:0007154

cell communication

2.14665E-29

8.87965E-32

289

641

males

GO:0044700

single organism signaling

2.48667E-29

1.0929E-31

280

628

males

GO:0023052

signaling

2.48667E-29

1.0929E-31

280

628

males

GO:0007165

signal transduction

1.98929E-28

9.00013E-31

269

606

males

  1. Fisher’s exact test showing top GO terms significantly over-represented in loci up-regulated in male or female gonad samples. For a complete list see Additional file 4: Table S2.