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Table 3 Sharpsnout seabream genes involved in sex determination and differentiation in other vertebrate taxa

From: The sex-specific transcriptome of the hermaphrodite sparid sharpsnout seabream (Diplodus puntazzo)

Starting sequence Species Gene name Gene description Locus Exp. up-regulation Obs. up-regulation
ENSORLT00000015555 medaka Wt1 Wilm’s tumour suppressor-1 comp117315_c1 M/F M
ENSORLT00000012371 medaka Wt1b Wilm’s tumour suppressor-1 comp117315_c1 M/F M
ENSORLT00000014817 medaka Dax1 dosage-sensitive sex-reversal-adrenal hypoplasia congenital-critical region of X chromosome, gene 1 comp87968_c1 M -
ENSXMAT00000015647 platyfish Dmrt1 double sex and mab-3 related transcription factor 1 comp110196_c1 M M
ENSONIT00000017862 tilapia Dmrt3 double sex and mab-3 related transcription factor 3 comp88038_c1 M M
ENSLOCT00000007854 spotted gar Dmrt6/Dmrtb1 double sex and mab-3 related transcription factor 6 - M -
ENSORLT00000021733 medaka Gata-4 GATA-binding protein 4 comp114090_c1 M/F M
ENSORLT00000025798 medaka Fgf9 fibroblast growth factor 9 - M -
ENSORLT00000012578 medaka Fgf20 fibroblast growth factor 20 comp85925_c1 M -
ENSONIT00000015290 tilapia Dhh desert hedgehog comp116302_c0 M F
ENSONIT00000006022 tilapia Amh anti-Mullerian hormone comp107049_c0 M M
ENSONIT00000015711 tilapia Amhr2 anti-Mullerian hormone receptor, type II comp111277_c1 M -
ENSONIT00000022132 tilapia Ar androgen receptor comp108409_c2 M M
ENSONIT00000016191 tilapia Arb androgen receptor beta comp122243_c0 M -
ENSONIT00000025518 tilapia Wnt4 Wingless-type MMTV integration site family 4 comp94275_c1 F -
ENSONIT00000016320 tilapia Wnt4b Wingless-type MMTV integration site family 4 b comp308556_c0 F -
ENSONIT00000020541 tilapia Rspo-1 R-spondin-1 comp102190_c3 F -
ENSONIT00000009116 tilapia Ctnnb1 catenin β-1 comp112822_c5 F F
ENSONIT00000026114 tilapia Foxl2 forkhead box transcription factor L2 comp95964_c0 F -
ENSONIT00000017958 tilapia Fst follistatin comp112642_c0 F -
ENSONIT00000000198 tilapia Cyp19a1 aromatase α comp117077_c0 F F
ENSONIT00000008152 tilapia Cyp11b 11beta-hydroxylase comp108630_c0 M M
ENSORLT00000018193 medaka Esr1 oestrogen receptor 1 comp117911_c10 F -
ENSORLT00000013323 medaka Erα oestrogen receptor α comp112646_c1 F -
ENSORLT00000022182 medaka Erβ oestrogen receptor β comp112065_c1 F -
ENSORLT00000022555 medaka Erβ2 oestrogen receptor β 2 comp108758_c0 F -
ENSORLT00000009986 medaka Sox9b SRY-related HMG-box 9 comp113806_c6 M -
ENSORLT00000023249 medaka Sox9 SRY-related HMG-box 9 comp108517_c9 M -
ENSONIT00000006616 tilapia Sox8 SRY-related HMG-box 8 comp113806_c6 M -
ENSONIT00000024737 tilapia Sox8a SRY-related HMG-box 8 comp70271_c1 M -
ENSONIT00000010558 tilapia Sox10 SRY-related HMG-box 10 comp116475_c6 M -
ENSONIT00000022743 tilapia Sox10(2 of 2) SRY-related HMG-box 10 comp114808_c13 M -
ENSONIT00000009624 tilapia Gsdf Gonadal soma derived factor comp113923_c0 M -
ENSONIT00000004791 tilapia Pdgfaa platelet-derived growth factor alpha a comp113241_c2 M M
ENSONIT00000006486 tilapia Pdgfab platelet-derived growth factor alpha b comp107178_c1 M -
ENSONIT00000016484 tilapia Pdgfba platelet-derived growth factor beta a comp117159_c4 M -
ENSONIT00000010783 tilapia Pdgfbb platelet-derived growth factor beta b comp113875_c0 M M
ENSONIT00000016453 tilapia Pdgfrb2 platelet-derived growth factor receptor, beta comp104719_c1 M M
ENSONIT00000022434 tilapia Pdgfrb1 platelet-derived growth factor receptor, beta comp113376_c0 M -
ENSONIT00000003760 tilapia Pdgfra platelet-derived growth factor receptor, alpha comp116299_c0 M M
ENSONIT00000025493 tilapia Sf1 steroidogenic factor-1 comp120045_c3 M/F M
ENSONIT00000009791 tilapia Srd5a1 steroid-5-alpha-reductase, alpha polypeptide 1 comp121181_c8 M -
ENSONIT00000008643 tilapia Srd5a2 5α-reductase 2 comp106131_c0 M -
ENSORLT00000000749 medaka Srd5a3 5α-reductase 3 comp115080_c0 M -
  1. The expected direction of expression (Exp. Up-regulation) is estimated from previous reports on other vertebrates, while the observed (Obs. Up-regulation) is the direction found in sharpsnout seabream gonads. M: over-expression observed in males, F: over-expression observed in females.
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