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Table 3 Sharpsnout seabream genes involved in sex determination and differentiation in other vertebrate taxa

From: The sex-specific transcriptome of the hermaphrodite sparid sharpsnout seabream (Diplodus puntazzo)

Starting sequence

Species

Gene name

Gene description

Locus

Exp. up-regulation

Obs. up-regulation

ENSORLT00000015555

medaka

Wt1

Wilm’s tumour suppressor-1

comp117315_c1

M/F

M

ENSORLT00000012371

medaka

Wt1b

Wilm’s tumour suppressor-1

comp117315_c1

M/F

M

ENSORLT00000014817

medaka

Dax1

dosage-sensitive sex-reversal-adrenal hypoplasia congenital-critical region of X chromosome, gene 1

comp87968_c1

M

-

ENSXMAT00000015647

platyfish

Dmrt1

double sex and mab-3 related transcription factor 1

comp110196_c1

M

M

ENSONIT00000017862

tilapia

Dmrt3

double sex and mab-3 related transcription factor 3

comp88038_c1

M

M

ENSLOCT00000007854

spotted gar

Dmrt6/Dmrtb1

double sex and mab-3 related transcription factor 6

-

M

-

ENSORLT00000021733

medaka

Gata-4

GATA-binding protein 4

comp114090_c1

M/F

M

ENSORLT00000025798

medaka

Fgf9

fibroblast growth factor 9

-

M

-

ENSORLT00000012578

medaka

Fgf20

fibroblast growth factor 20

comp85925_c1

M

-

ENSONIT00000015290

tilapia

Dhh

desert hedgehog

comp116302_c0

M

F

ENSONIT00000006022

tilapia

Amh

anti-Mullerian hormone

comp107049_c0

M

M

ENSONIT00000015711

tilapia

Amhr2

anti-Mullerian hormone receptor, type II

comp111277_c1

M

-

ENSONIT00000022132

tilapia

Ar

androgen receptor

comp108409_c2

M

M

ENSONIT00000016191

tilapia

Arb

androgen receptor beta

comp122243_c0

M

-

ENSONIT00000025518

tilapia

Wnt4

Wingless-type MMTV integration site family 4

comp94275_c1

F

-

ENSONIT00000016320

tilapia

Wnt4b

Wingless-type MMTV integration site family 4 b

comp308556_c0

F

-

ENSONIT00000020541

tilapia

Rspo-1

R-spondin-1

comp102190_c3

F

-

ENSONIT00000009116

tilapia

Ctnnb1

catenin β-1

comp112822_c5

F

F

ENSONIT00000026114

tilapia

Foxl2

forkhead box transcription factor L2

comp95964_c0

F

-

ENSONIT00000017958

tilapia

Fst

follistatin

comp112642_c0

F

-

ENSONIT00000000198

tilapia

Cyp19a1

aromatase α

comp117077_c0

F

F

ENSONIT00000008152

tilapia

Cyp11b

11beta-hydroxylase

comp108630_c0

M

M

ENSORLT00000018193

medaka

Esr1

oestrogen receptor 1

comp117911_c10

F

-

ENSORLT00000013323

medaka

Erα

oestrogen receptor α

comp112646_c1

F

-

ENSORLT00000022182

medaka

Erβ

oestrogen receptor β

comp112065_c1

F

-

ENSORLT00000022555

medaka

Erβ2

oestrogen receptor β 2

comp108758_c0

F

-

ENSORLT00000009986

medaka

Sox9b

SRY-related HMG-box 9

comp113806_c6

M

-

ENSORLT00000023249

medaka

Sox9

SRY-related HMG-box 9

comp108517_c9

M

-

ENSONIT00000006616

tilapia

Sox8

SRY-related HMG-box 8

comp113806_c6

M

-

ENSONIT00000024737

tilapia

Sox8a

SRY-related HMG-box 8

comp70271_c1

M

-

ENSONIT00000010558

tilapia

Sox10

SRY-related HMG-box 10

comp116475_c6

M

-

ENSONIT00000022743

tilapia

Sox10(2 of 2)

SRY-related HMG-box 10

comp114808_c13

M

-

ENSONIT00000009624

tilapia

Gsdf

Gonadal soma derived factor

comp113923_c0

M

-

ENSONIT00000004791

tilapia

Pdgfaa

platelet-derived growth factor alpha a

comp113241_c2

M

M

ENSONIT00000006486

tilapia

Pdgfab

platelet-derived growth factor alpha b

comp107178_c1

M

-

ENSONIT00000016484

tilapia

Pdgfba

platelet-derived growth factor beta a

comp117159_c4

M

-

ENSONIT00000010783

tilapia

Pdgfbb

platelet-derived growth factor beta b

comp113875_c0

M

M

ENSONIT00000016453

tilapia

Pdgfrb2

platelet-derived growth factor receptor, beta

comp104719_c1

M

M

ENSONIT00000022434

tilapia

Pdgfrb1

platelet-derived growth factor receptor, beta

comp113376_c0

M

-

ENSONIT00000003760

tilapia

Pdgfra

platelet-derived growth factor receptor, alpha

comp116299_c0

M

M

ENSONIT00000025493

tilapia

Sf1

steroidogenic factor-1

comp120045_c3

M/F

M

ENSONIT00000009791

tilapia

Srd5a1

steroid-5-alpha-reductase, alpha polypeptide 1

comp121181_c8

M

-

ENSONIT00000008643

tilapia

Srd5a2

5α-reductase 2

comp106131_c0

M

-

ENSORLT00000000749

medaka

Srd5a3

5α-reductase 3

comp115080_c0

M

-

  1. The expected direction of expression (Exp. Up-regulation) is estimated from previous reports on other vertebrates, while the observed (Obs. Up-regulation) is the direction found in sharpsnout seabream gonads. M: over-expression observed in males, F: over-expression observed in females.