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Table 5 Expression Pattern of eighteen genes selected for validation

From: Large-scale analysis of differential gene expression in coffee genotypes resistant and susceptible to leaf miner–toward the identification of candidate genes for marker assisted-selection

Name

Blast SOL network genomics

Annotation

Fold-change value*(microarray)

ΔΔCt value**(relative expression)

Coef. Pearson.***

0U17

NM

Protein

94

39

0,9242

0U6

SGN E1316291

Acid phosphatase

236

15

 

0U14

SGN E667484

Protein

115

36

 

0U2

SGN E1352064

Caffeine synthase

642

179

 

0U4

SGN E1310344

Metallothionein-like protein

280

8,45

 

0U322

SGN E450221

nadp-dependent d-sorbitol-6-phosphate dehydrogenase

6,56

3

 

0U1

SGN E628893

No hits

1000

186,9

 

0U42

SGN E636199

---NA---

43

8,16

 

0D6

SGN E661762

---NA---

-35

-4,3

 

0D10

SGN E1033676

Glycerol-phosphate acyltransferase

-16

-1,8

 

0D2

SGN E676870

Protein

-235

-120

 

0D1

SGN E1320843

Protein

-445

-200

 

0D19

SGN E673783

Isocitrate lyase

-8

-6

 

0D3

SGN E1320843

Zinc finger

-126

-17

 

0D4

SGN E1325444

Hypothetical protein

-62

-36

 

0D8

NM

Glycerol-3-phosphate acyltransferase 6

-17

-2,3

 

0D9

SGN E1321887

gdsl-motif lipase hydrolase-like

-16

-2,2

 

0D7

NM

Hypothetical protein

-24

-5,8

 
  1. *Microarray analysis value.
  2. **qRT-PCR analysis value.
  3. ***Pearson coefficient correlation value.