From: Motif depletion in bacteriophages infecting hosts with CRISPR systems
 | r PAM |  |  |  |  | |
---|---|---|---|---|---|---|
PAM | CRISPR- | CRISPR+ | Difference | p-value | Strain resampling | Method |
Bacteria: 28 (297) CRISPR+, 101 (391) CRISPR- | Â | Â | ||||
AAG | 0.7174 | -0.001687 | 0.07342 | 4.499e-07 | 92 | res |
AAG | 0.1177 | 0.1201 | -0.002424 | 0.03667 | 32 | sub |
AWG | 0.5161 | 0.04535 | 0.006267 | 0.6928 | - | res |
AWG | 0.05169 | 0.02959 | 0.02209 | 0.001556 | 66 | sub |
AAY | -0.009426 | 0.02582 | -0.03525 | 1.461e-06 | 100 | res |
AAY | -0.03633 | -0.01978 | -0.01656 | 7.319e-06 | 99 | sub |
Gammaproteobacteria: 17 (239) CRISPR+, 27 (88) CRISPR- | Â | Â | ||||
AAG | 0.06205 | 0.01468 | 0.04737 | 0.1733 | - | res |
AAG | 0.1745 | 0.1201 | 0.05443 | 0.0009832 | 99 | sub |
AWG | 0.09614 | 0.05743 | 0.03871 | 0.3779 | - | res |
AWG | 0.08496 | 0.03524 | 0.04972 | 0.03247 | 49 | sub |
Pseudomonas: 1 (54) CRISPR+, 4 (23) CRISPR- | Â | Â | ||||
AAG | 0.09970 | 09930 | 0.0004042 | 0.8282 | - | res |
AAG | 0.2794 | 0.2654 | 0.01402 | 0.4867 | - | sub |
AWG | 0.05831 | 0.1013 | -0.04294 | 0.4525 | - | res |
AWG | 0.1649 | 0.1636 | 0.001262 | 0.2403 | - | sub |
Vibrio: 1 (19) CRISPR+, 3 (12) CRISPR- | Â | Â | ||||
AAG | 0.1384 | 0.04731 | 0.09112 | 0.002313 | 99 | res |
AAG | 0.2323 | 0.07019 | 0.1621 | 0.01414 | 81 | sub |
AWG | 0.2026 | 0.05405 | 0.1485 | 0.0001185 | 99 | res |
AWG | 0.09707 | 0.01647 | 0.08060 | 0.003148 | 99 | sub |
not Proteobacteria: 10 (49) CRISPR+, 54 (243) CRISPR- | Â | Â | ||||
AAY | -0.01711 | 0.007357 | -0.009751 | 0.2059 | - | res |
AAY | -0.2643 | -0.04995 | 0.02352 | 0.003247 | 68 | sub |
Lactobacillus: 2 (5) CRISPR+, 5 (11) CRISPR- | Â | Â | ||||
AAY | -0.02047 | -0.02471 | -0.005757 | 1 | - | res |
AAY | 0.01788 | -0.029311 | 0.05710 | 0.06868 | - | sub |
Mycobacterium: 1 (12) CRISPR+, 2 (3) CRISPR- | Â | Â | ||||
AAY | 0.006024 | 0.1491 | -0.1431 | 0.9451 | - | res |
AAY | -0.06072 | 0.0009736 | -0.06170 | 0.3648 | - | sub |