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Table 2 Basic statistics of whole exome sequences generated by the Ion Proton sequencer

From: Validation of multiple single nucleotide variation calls by additional exome analysis with a semiconductor sequencer to supplement data of whole-genome sequencing of a human population

Samples Total bases (GB) Average depth Average read length (bp) Aligned bases (GB) Aligned bases (%) SNPs
01_1 6.77 65.9 121 6.40 96 58037
01_2 8.37 85.1 127 7.90 95
02 10.8 122 142 10.4 98 69667
03_1 8.24 78.5 144 8.00 97 67493
03_2 8.93 93.0 139 8.60 97
04 11.2 126 149 10.8 97 53811
05 12.2 147 148 11.9 98 46923
06 9.25 94.5 149 9.00 98 52516
07 12.1 135 149 11.8 98 53993
08 10.7 103 138 10.3 96 52243
09 10.9 121 137 10.5 97 50166
10 11.6 136 142 11.3 97 50781
11 10.4 85.5 134 10.0 97 67810
12 11.3 133 146 10.9 97 54335
Mean 10.2 109 140 9.84 97.0 56481.25
%CV 15 23 5.9 16 0.87 12.94
  1. Two independent runs (indicated as _1 and 2) were performed for Samples 01 and 03.