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Table 2 Pathway classification by MapMan

From: BAC and RNA sequencing reveal the brown planthopper resistance gene BPH15 in a recombination cold spot that mediates a unique defense mechanism

Pathways S-all R-all S_R-all
  U D U D U D
Ethylene 21 7 14 3 4 8
Jasmonate 4 2 2 0 0 0
Salicylic acid 4 0 2 0 0 0
Receptor kinase 20 5 9 3 5 4
Ca2+ signaling 14 8 6 3 1 3
Biotic stress 35 8 13 2 4 20
Wounding 4 1 4 0 1 1
AP2/EREBP TF 15 3 9 0 1 8
bHLH TF 6 1 7 0 0 1
Zinc finger family TF 12 1 5 1 4 4
WRKY domain TF 10 1 7 0 2 1
Protein synthesis, targeting and folding 6 148 3 30 71 9
Protein degradation-ubiquitin 26 4 17 1 5 9
Protein posttranslational modification 25 12 12 0 3 8
Bowman–Birk-type bran trypsin inhibitor 7 1 6 1 0 5
Glucan endo-1,3-β-glucosidase 11 2 6 0 1 9
Photosynthesis 8 97 4 27 38 5
Tetrapyrrole synthesis 0 23 0 10 14 1
Major CHO synthesis 2 6 2 2 2 0
Major CHO degradation 6 3 3 1 3 2
Lipid metabolism 5 51 6 5 26 5
TCA, mitochondrial electron transport 2 22 3 1 1 3
  1. S-all: total DEG number in comparisons of S0_S6 and S0_S48; R-all: DEG number in comparisons of R0_R6 and R0_R48; S_R-all: DEG number in comparisons of S0_R0, S6_R6 and S48_R48.U: upregulated; D: downregulated.