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Table 1 Top 30 novel miRNAs in P. alecto

From: Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing

miRNA

miRDeep2 score

Mature reads

Loop reads

Star reads

Mature sequence

Top BLAST hit

pal-can-034

1273.2

2480

0

11

augaccuaugaaucgacagaca

cgr-miR-215-5p

pal-can-081

145.7

267

0

10

accugugcccuucugaguagc

rno-miR-465-3p

pal-can-091

91.6

130

0

41

aauggcaccuuucugaguagu

ppy-miR-513a-2-3p

pal-can-101

69.3

111

0

23

ugcugcucagggacggggcga

 

pal-can-102

69.2

131

0

3

ugcuagggcuagagagcgagugc

 

pal-can-103

61.3

106

0

6

ugauugacagcuuugagagugg

cfa-miR-514

pal-can-119

37.1

33

0

38

gaccuaagcccuucugaguau

 

pal-can-125

30.1

45

0

5

caacucuaaggggcaucauuca

 

pal-can-133

23.5

36

0

8

cgccuagaugaugccuuucuu

ppy-miR-337-3p

pal-can-140

15.3

11

5

12

aaaugguacccuagugacuaca

rno-miR-224-3p

pal-can-157

6.6

11

0

1

uaacaggcauuucugagguga

 

pal-can-187

5.5

81

0

0

uuuccggcuuagugggugugu

eca-miR-1180

pal-can-179

5.5

38

0

4

uacucagaaggggccagguuac

 

pal-can-195

5.4

38

0

4

uacucagaaggggccagguuac

 

pal-can-227

4.9

25

0

0

aucucgguggaaccucca

 

pal-can-231

4.8

44

0

0

gagagaucagaggugcagagu

bta-miR-6529

pal-can-245

4.5

10

0

0

uugcagcugccgggagugauuu

eca-miR-1301

pal-can-247

4.3

10

0

0

aggggcagcaugguguagcag

 

pal-can-249

4.3

50

0

0

uagguaguuucuuguuguuggg

ssc-miR-196b

pal-can-254

3.8

267

0

0

cagaagaguagauugauuggu

 

pal-can-257

2.9

69

0

0

agagguaaaaauuugauuuga

bta-miR-6119-5p

pal-can-263

2.5

43

0

0

aggaauguaaagaagcaugu

 

pal-can-271

2.1

69

0

0

acaucaagacuaggcauacacug

 

pal-can-276

1.8

162

0

0

aagggguucugccgucgguc

oar-miR-541-5p

pal-can-278

1.8

12

0

0

aucucgcuggggccucca

 

pal-can-280

1.7

25

0

0

ucaagucccuguucgggcgcca

mmu-miR-5097

pal-can-290

1.5

23

0

0

ugggggagagaacagguagaca

 

pal-can-303

1.2

14

0

0

aauuugggccuuucugaguaga

age-miR-506

pal-can-307

1

15

0

0

agccuugugacugacgaucggaca

 

pal-can-316

0.9

10

0

0

uucgcaagaaggugucauucau

age-miR-513c