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Table 4 Numbers of Simple Sequence Repeats (SSRs) and their co-localization with pre-miRNAs in sweet orange

From: Genome-wide comparison of microRNAs and their targeted transcripts among leaf, flower and fruit of sweet orange

Repeat unit Repeat type Frequency of SSR region co-localize with pre-miRNAs
A Mononucleotide 1
G Mononucleotide 1
T Mononucleotide 5
AC Dinucleotide 2
AG Dinucleotide 5
AT Dinucleotide 2
CT Dinucleotide 3
GA Dinucleotide 7
GT Dinucleotide 1
TA Dinucleotide 12
TC Dinucleotide 3
AAG Trinucleotide 1
ACA Trinucleotide 1
ATA Trinucleotide 1
ATT Trinucleotide 3
CAG Trinucleotide 1
CTT Trinucleotide 7
GAT Trinucleotide 2
GTG Trinucleotide 1
TAA Trinucleotide 5
TCA Trinucleotide 1
TGC Trinucleotide 1
TGG Trinucleotide 2
TTC Trinucleotide 5
CATG Tetranucleotide 1
TCAT Tetranucleotide 1
TGCA Tetranucleotide 1
TTAA Tetranucleotide 2
TTCT Tetranucleotide 4
TTTG Tetranucleotide 1
TATAAT Hexanucleotide 2